Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF139Q8WU17 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF139Q8WU17 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
RNF139Q8WU17 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF139Q8WU17 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF139Q8WU17 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF139Q8WU17 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF139Q8WU17 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF139Q8WU17 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF139Q8WU17 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF139Q8WU17 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF139Q8WU17 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF139Q8WU17 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
RNF139Q8WU17 AC013268.1-206ENST00000638368 961 ntBASIC21.84■■□□□ 1.09
RNF139Q8WU17 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF139Q8WU17 AC112229.1-201ENST00000639295 961 ntBASIC21.84■■□□□ 1.09
RNF139Q8WU17 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF139Q8WU17 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF139Q8WU17 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.84■■□□□ 1.09
RNF139Q8WU17 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
RNF139Q8WU17 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.84■■□□□ 1.09
RNF139Q8WU17 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
RNF139Q8WU17 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF139Q8WU17 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF139Q8WU17 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF139Q8WU17 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF139Q8WU17 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
RNF139Q8WU17 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF139Q8WU17 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF139Q8WU17 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF139Q8WU17 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF139Q8WU17 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF139Q8WU17 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF139Q8WU17 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF139Q8WU17 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF139Q8WU17 AC245052.3-201ENST00000450182 901 ntBASIC21.83■■□□□ 1.09
RNF139Q8WU17 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF139Q8WU17 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF139Q8WU17 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF139Q8WU17 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.83■■□□□ 1.09
RNF139Q8WU17 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.83■■□□□ 1.08
RNF139Q8WU17 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF139Q8WU17 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.83■■□□□ 1.08
RNF139Q8WU17 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF139Q8WU17 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RNF139Q8WU17 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF139Q8WU17 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF139Q8WU17 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF139Q8WU17 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF139Q8WU17 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF139Q8WU17 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF139Q8WU17 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RNF139Q8WU17 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF139Q8WU17 RAP2CP1-201ENST00000605103 478 ntBASIC21.82■■□□□ 1.08
RNF139Q8WU17 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF139Q8WU17 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.82■■□□□ 1.08
RNF139Q8WU17 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RNF139Q8WU17 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF139Q8WU17 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF139Q8WU17 RBM17P2-201ENST00000616397 1405 ntBASIC21.81■■□□□ 1.08
RNF139Q8WU17 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF139Q8WU17 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF139Q8WU17 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF139Q8WU17 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF139Q8WU17 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RNF139Q8WU17 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF139Q8WU17 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF139Q8WU17 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF139Q8WU17 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF139Q8WU17 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RNF139Q8WU17 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF139Q8WU17 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF139Q8WU17 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF139Q8WU17 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF139Q8WU17 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RNF139Q8WU17 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF139Q8WU17 AC006970.2-201ENST00000450065 779 ntBASIC21.8■■□□□ 1.08
RNF139Q8WU17 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF139Q8WU17 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF139Q8WU17 AC243732.1-201ENST00000612648 864 ntBASIC21.8■■□□□ 1.08
RNF139Q8WU17 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF139Q8WU17 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF139Q8WU17 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF139Q8WU17 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF139Q8WU17 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF139Q8WU17 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF139Q8WU17 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF139Q8WU17 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RNF139Q8WU17 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF139Q8WU17 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF139Q8WU17 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF139Q8WU17 CNN2P6-201ENST00000439038 900 ntBASIC21.79■■□□□ 1.08
RNF139Q8WU17 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF139Q8WU17 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF139Q8WU17 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
RNF139Q8WU17 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF139Q8WU17 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF139Q8WU17 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF139Q8WU17 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF139Q8WU17 FEM1AP4-201ENST00000443167 1987 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms