Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMARCC2Q8TAQ2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMARCC2Q8TAQ2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMARCC2Q8TAQ2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMARCC2Q8TAQ2 AC006015.1-201ENST00000429970 570 ntBASIC24.36■■□□□ 1.49
SMARCC2Q8TAQ2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.36■■□□□ 1.49
SMARCC2Q8TAQ2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.36■■□□□ 1.49
SMARCC2Q8TAQ2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SMARCC2Q8TAQ2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.36■■□□□ 1.49
SMARCC2Q8TAQ2 PLK5-205ENST00000642079 1969 ntBASIC24.36■■□□□ 1.49
SMARCC2Q8TAQ2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.36■■□□□ 1.49
SMARCC2Q8TAQ2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMARCC2Q8TAQ2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMARCC2Q8TAQ2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMARCC2Q8TAQ2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMARCC2Q8TAQ2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMARCC2Q8TAQ2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.35■■□□□ 1.49
SMARCC2Q8TAQ2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.35■■□□□ 1.49
SMARCC2Q8TAQ2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SMARCC2Q8TAQ2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.35■■□□□ 1.49
SMARCC2Q8TAQ2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.35■■□□□ 1.49
SMARCC2Q8TAQ2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SMARCC2Q8TAQ2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMARCC2Q8TAQ2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SMARCC2Q8TAQ2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMARCC2Q8TAQ2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
SMARCC2Q8TAQ2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 AC061975.6-201ENST00000579045 1553 ntBASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 AP001160.3-201ENST00000601484 763 ntBASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SMARCC2Q8TAQ2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24.33■■□□□ 1.49
SMARCC2Q8TAQ2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMARCC2Q8TAQ2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SMARCC2Q8TAQ2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMARCC2Q8TAQ2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.33■■□□□ 1.49
SMARCC2Q8TAQ2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.33■■□□□ 1.49
SMARCC2Q8TAQ2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMARCC2Q8TAQ2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24.33■■□□□ 1.48
SMARCC2Q8TAQ2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SMARCC2Q8TAQ2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 AL157384.1-201ENST00000445995 2473 ntBASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SMARCC2Q8TAQ2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 KRT18P11-201ENST00000435214 1283 ntBASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 AC138907.5-202ENST00000569484 235 ntBASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 RARRES2P11-201ENST00000635158 484 ntBASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMARCC2Q8TAQ2 AC006128.1-201ENST00000624704 1661 ntBASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms