Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 AC008894.3-201ENST00000624324 3103 ntBASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 FBXW4P1-201ENST00000426721 2239 ntBASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 RARRES2P7-201ENST00000567349 469 ntBASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 CHML-205ENST00000638160 705 ntTSL 3 BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 AC092053.2-201ENST00000640557 1818 ntBASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 AL139384.1-201ENST00000612143 3047 ntBASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
SPTSSBQ8NFR3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SPTSSBQ8NFR3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 MIR762-201ENST00000390236 83 ntBASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms