Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.25■□□□□ 0.83
RAB42Q8N4Z0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB42Q8N4Z0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.25■□□□□ 0.83
RAB42Q8N4Z0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB42Q8N4Z0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB42Q8N4Z0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB42Q8N4Z0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB42Q8N4Z0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB42Q8N4Z0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB42Q8N4Z0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB42Q8N4Z0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RAB42Q8N4Z0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 AC243732.1-201ENST00000612648 864 ntBASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 AC092666.2-201ENST00000613287 246 ntBASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 AC011767.1-201ENST00000617410 1153 ntBASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB42Q8N4Z0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 AC010536.3-201ENST00000620306 533 ntBASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
RAB42Q8N4Z0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
RAB42Q8N4Z0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 AC013268.1-206ENST00000638368 961 ntBASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 AC112229.1-201ENST00000639295 961 ntBASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RAB42Q8N4Z0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB42Q8N4Z0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB42Q8N4Z0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
RAB42Q8N4Z0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms