Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 LSM12P1-201ENST00000411836 588 ntBASIC21.18■□□□□ 0.98
CHPFQ8IZ52 AC091799.1-201ENST00000422823 811 ntBASIC21.18■□□□□ 0.98
CHPFQ8IZ52 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.18■□□□□ 0.98
CHPFQ8IZ52 CDV3P1-201ENST00000471403 739 ntBASIC21.18■□□□□ 0.98
CHPFQ8IZ52 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.18■□□□□ 0.98
CHPFQ8IZ52 ITM2C-210ENST00000620962 501 ntBASIC21.18■□□□□ 0.98
CHPFQ8IZ52 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHPFQ8IZ52 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHPFQ8IZ52 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHPFQ8IZ52 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CHPFQ8IZ52 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CHPFQ8IZ52 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHPFQ8IZ52 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CHPFQ8IZ52 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHPFQ8IZ52 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHPFQ8IZ52 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.17■□□□□ 0.98
CHPFQ8IZ52 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.17■□□□□ 0.98
CHPFQ8IZ52 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.17■□□□□ 0.98
CHPFQ8IZ52 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.17■□□□□ 0.98
CHPFQ8IZ52 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.17■□□□□ 0.98
CHPFQ8IZ52 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CHPFQ8IZ52 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHPFQ8IZ52 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHPFQ8IZ52 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHPFQ8IZ52 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CHPFQ8IZ52 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.16■□□□□ 0.98
CHPFQ8IZ52 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
CHPFQ8IZ52 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 AC008687.6-201ENST00000596318 630 ntBASIC21.15■□□□□ 0.98
CHPFQ8IZ52 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 FAM21FP-204ENST00000608637 956 ntBASIC21.15■□□□□ 0.98
CHPFQ8IZ52 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHPFQ8IZ52 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.14■□□□□ 0.98
CHPFQ8IZ52 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHPFQ8IZ52 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHPFQ8IZ52 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
CHPFQ8IZ52 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms