Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCDC146Q8IYE0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCDC146Q8IYE0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCDC146Q8IYE0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCDC146Q8IYE0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCDC146Q8IYE0 CNN2P6-201ENST00000439038 900 ntBASIC27.58■■■□□ 2.01
CCDC146Q8IYE0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC27.58■■■□□ 2.01
CCDC146Q8IYE0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
CCDC146Q8IYE0 AC073111.5-205ENST00000641717 521 ntBASIC27.58■■■□□ 2.01
CCDC146Q8IYE0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCDC146Q8IYE0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCDC146Q8IYE0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCDC146Q8IYE0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCDC146Q8IYE0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
CCDC146Q8IYE0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2
CCDC146Q8IYE0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC27.58■■■□□ 2
CCDC146Q8IYE0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC27.57■■■□□ 2
CCDC146Q8IYE0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC27.57■■■□□ 2
CCDC146Q8IYE0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
CCDC146Q8IYE0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
CCDC146Q8IYE0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC27.57■■■□□ 2
CCDC146Q8IYE0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC27.57■■■□□ 2
CCDC146Q8IYE0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CCDC146Q8IYE0 CDCA4P2-201ENST00000441182 718 ntBASIC27.57■■■□□ 2
CCDC146Q8IYE0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC27.57■■■□□ 2
CCDC146Q8IYE0 TERF1P5-201ENST00000477545 1207 ntBASIC27.57■■■□□ 2
CCDC146Q8IYE0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
CCDC146Q8IYE0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC27.57■■■□□ 2
CCDC146Q8IYE0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC27.57■■■□□ 2
CCDC146Q8IYE0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CCDC146Q8IYE0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC27.57■■■□□ 2
CCDC146Q8IYE0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CCDC146Q8IYE0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC27.57■■■□□ 2
CCDC146Q8IYE0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
CCDC146Q8IYE0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC27.56■■■□□ 2
CCDC146Q8IYE0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CCDC146Q8IYE0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC27.56■■■□□ 2
CCDC146Q8IYE0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC27.56■■■□□ 2
CCDC146Q8IYE0 AC245052.3-201ENST00000450182 901 ntBASIC27.56■■■□□ 2
CCDC146Q8IYE0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC27.56■■■□□ 2
CCDC146Q8IYE0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC27.56■■■□□ 2
CCDC146Q8IYE0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC27.56■■■□□ 2
CCDC146Q8IYE0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC27.56■■■□□ 2
CCDC146Q8IYE0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC27.56■■■□□ 2
CCDC146Q8IYE0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CCDC146Q8IYE0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC27.55■■■□□ 2
CCDC146Q8IYE0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CCDC146Q8IYE0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
CCDC146Q8IYE0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC27.55■■■□□ 2
CCDC146Q8IYE0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC27.55■■■□□ 2
CCDC146Q8IYE0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC27.55■■■□□ 2
CCDC146Q8IYE0 GAS2L1P2-201ENST00000436355 1356 ntBASIC27.55■■■□□ 2
CCDC146Q8IYE0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
CCDC146Q8IYE0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
CCDC146Q8IYE0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC27.55■■■□□ 2
CCDC146Q8IYE0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC27.55■■■□□ 2
CCDC146Q8IYE0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CCDC146Q8IYE0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
CCDC146Q8IYE0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC27.54■■■□□ 2
CCDC146Q8IYE0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CCDC146Q8IYE0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC27.54■■■□□ 2
CCDC146Q8IYE0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC27.54■■■□□ 2
CCDC146Q8IYE0 AC091799.1-201ENST00000422823 811 ntBASIC27.54■■■□□ 2
CCDC146Q8IYE0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC27.54■■■□□ 2
CCDC146Q8IYE0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC27.54■■■□□ 2
CCDC146Q8IYE0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC27.54■■■□□ 2
CCDC146Q8IYE0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC27.54■■■□□ 2
CCDC146Q8IYE0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
CCDC146Q8IYE0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CCDC146Q8IYE0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
CCDC146Q8IYE0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
CCDC146Q8IYE0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC27.53■■■□□ 2
CCDC146Q8IYE0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC27.53■■■□□ 2
CCDC146Q8IYE0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC27.53■■■□□ 2
CCDC146Q8IYE0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC27.53■■■□□ 2
CCDC146Q8IYE0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
CCDC146Q8IYE0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
CCDC146Q8IYE0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CCDC146Q8IYE0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC27.53■■■□□ 2
CCDC146Q8IYE0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC27.53■■■□□ 2
CCDC146Q8IYE0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC27.53■■■□□ 2
CCDC146Q8IYE0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
CCDC146Q8IYE0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
CCDC146Q8IYE0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CCDC146Q8IYE0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC27.52■■■□□ 2
CCDC146Q8IYE0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC27.52■■■□□ 2
CCDC146Q8IYE0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC27.52■■■□□ 2
CCDC146Q8IYE0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC27.52■■■□□ 2
CCDC146Q8IYE0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.52■■■□□ 2
CCDC146Q8IYE0 RAP2CP1-201ENST00000605103 478 ntBASIC27.52■■■□□ 2
CCDC146Q8IYE0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC27.52■■■□□ 2
CCDC146Q8IYE0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CCDC146Q8IYE0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC27.52■■■□□ 2
CCDC146Q8IYE0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC27.52■■■□□ 2
CCDC146Q8IYE0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC27.52■■■□□ 2
CCDC146Q8IYE0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
CCDC146Q8IYE0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
CCDC146Q8IYE0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
CCDC146Q8IYE0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC27.51■■□□□ 1.99
CCDC146Q8IYE0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.51■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms