Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
APLFQ8IW19 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.49■□□□□ 0.87
APLFQ8IW19 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
APLFQ8IW19 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.49■□□□□ 0.87
APLFQ8IW19 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
APLFQ8IW19 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
APLFQ8IW19 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
APLFQ8IW19 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.49■□□□□ 0.87
APLFQ8IW19 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.48■□□□□ 0.87
APLFQ8IW19 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.48■□□□□ 0.87
APLFQ8IW19 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.48■□□□□ 0.87
APLFQ8IW19 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.48■□□□□ 0.87
APLFQ8IW19 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.48■□□□□ 0.87
APLFQ8IW19 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
APLFQ8IW19 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
APLFQ8IW19 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
APLFQ8IW19 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.48■□□□□ 0.87
APLFQ8IW19 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
APLFQ8IW19 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APLFQ8IW19 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
APLFQ8IW19 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APLFQ8IW19 BX323043.1-201ENST00000641006 1765 ntBASIC20.47■□□□□ 0.87
APLFQ8IW19 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APLFQ8IW19 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
APLFQ8IW19 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APLFQ8IW19 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APLFQ8IW19 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.47■□□□□ 0.87
APLFQ8IW19 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.47■□□□□ 0.87
APLFQ8IW19 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.47■□□□□ 0.87
APLFQ8IW19 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
APLFQ8IW19 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APLFQ8IW19 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.46■□□□□ 0.87
APLFQ8IW19 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APLFQ8IW19 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.46■□□□□ 0.87
APLFQ8IW19 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.46■□□□□ 0.87
APLFQ8IW19 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
APLFQ8IW19 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.46■□□□□ 0.87
APLFQ8IW19 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.46■□□□□ 0.87
APLFQ8IW19 TPRG1LP1-201ENST00000598702 760 ntBASIC20.46■□□□□ 0.87
APLFQ8IW19 AC080038.1-201ENST00000611274 1154 ntBASIC20.46■□□□□ 0.87
APLFQ8IW19 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APLFQ8IW19 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.46■□□□□ 0.87
APLFQ8IW19 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APLFQ8IW19 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APLFQ8IW19 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.46■□□□□ 0.87
APLFQ8IW19 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APLFQ8IW19 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
APLFQ8IW19 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.45■□□□□ 0.86
APLFQ8IW19 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.45■□□□□ 0.86
APLFQ8IW19 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APLFQ8IW19 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APLFQ8IW19 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
APLFQ8IW19 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APLFQ8IW19 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.45■□□□□ 0.86
APLFQ8IW19 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
APLFQ8IW19 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.45■□□□□ 0.86
APLFQ8IW19 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.45■□□□□ 0.86
APLFQ8IW19 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.45■□□□□ 0.86
APLFQ8IW19 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
APLFQ8IW19 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APLFQ8IW19 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APLFQ8IW19 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
APLFQ8IW19 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APLFQ8IW19 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
APLFQ8IW19 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APLFQ8IW19 AL353803.4-201ENST00000565882 1934 ntBASIC20.45■□□□□ 0.86
APLFQ8IW19 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
APLFQ8IW19 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APLFQ8IW19 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APLFQ8IW19 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
APLFQ8IW19 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
APLFQ8IW19 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
APLFQ8IW19 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
APLFQ8IW19 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APLFQ8IW19 HLA-L-209ENST00000420110 1011 ntBASIC20.44■□□□□ 0.86
APLFQ8IW19 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.44■□□□□ 0.86
APLFQ8IW19 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.44■□□□□ 0.86
APLFQ8IW19 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.44■□□□□ 0.86
APLFQ8IW19 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.44■□□□□ 0.86
APLFQ8IW19 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.44■□□□□ 0.86
APLFQ8IW19 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.44■□□□□ 0.86
APLFQ8IW19 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.44■□□□□ 0.86
APLFQ8IW19 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
APLFQ8IW19 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
APLFQ8IW19 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APLFQ8IW19 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms