Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 AC079089.2-201ENST00000531211 1277 ntBASIC19.44■□□□□ 0.7
CCDC71Q8IV32 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC71Q8IV32 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 AL049796.1-201ENST00000565336 1766 ntBASIC19.43■□□□□ 0.7
CCDC71Q8IV32 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC71Q8IV32 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 BX005040.4-201ENST00000637145 1518 ntBASIC19.42■□□□□ 0.7
CCDC71Q8IV32 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC71Q8IV32 AC004854.2-201ENST00000608450 1441 ntBASIC19.42■□□□□ 0.7
CCDC71Q8IV32 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC71Q8IV32 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC71Q8IV32 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
CCDC71Q8IV32 OXCT2P1-201ENST00000447263 1535 ntBASIC19.41■□□□□ 0.7
CCDC71Q8IV32 AC007952.6-201ENST00000573168 2673 ntBASIC19.41■□□□□ 0.7
CCDC71Q8IV32 AC003957.1-201ENST00000625108 2673 ntBASIC19.41■□□□□ 0.7
CCDC71Q8IV32 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC71Q8IV32 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC71Q8IV32 HLA-L-209ENST00000420110 1011 ntBASIC19.41■□□□□ 0.7
CCDC71Q8IV32 AC006015.1-201ENST00000429970 570 ntBASIC19.41■□□□□ 0.7
CCDC71Q8IV32 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC71Q8IV32 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC71Q8IV32 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC71Q8IV32 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC71Q8IV32 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC71Q8IV32 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC71Q8IV32 AP004607.4-201ENST00000530158 1459 ntBASIC19.41■□□□□ 0.7
CCDC71Q8IV32 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC71Q8IV32 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC71Q8IV32 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC71Q8IV32 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC71Q8IV32 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms