Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF135Q8IUD6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF135Q8IUD6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF135Q8IUD6 AC080038.3-201ENST00000623346 1952 ntBASIC22.03■■□□□ 1.12
RNF135Q8IUD6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF135Q8IUD6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF135Q8IUD6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF135Q8IUD6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 AC008403.3-201ENST00000598924 454 ntBASIC22.02■■□□□ 1.12
RNF135Q8IUD6 Z99916.2-201ENST00000604037 246 ntBASIC22.02■■□□□ 1.12
RNF135Q8IUD6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF135Q8IUD6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
RNF135Q8IUD6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.02■■□□□ 1.11
RNF135Q8IUD6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.02■■□□□ 1.11
RNF135Q8IUD6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF135Q8IUD6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RNF135Q8IUD6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF135Q8IUD6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RNF135Q8IUD6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.01■■□□□ 1.11
RNF135Q8IUD6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RNF135Q8IUD6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.01■■□□□ 1.11
RNF135Q8IUD6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF135Q8IUD6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF135Q8IUD6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF135Q8IUD6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF135Q8IUD6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
RNF135Q8IUD6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.01■■□□□ 1.11
RNF135Q8IUD6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF135Q8IUD6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF135Q8IUD6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
RNF135Q8IUD6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF135Q8IUD6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
RNF135Q8IUD6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RNF135Q8IUD6 C1QBPP2-201ENST00000528754 825 ntBASIC22■■□□□ 1.11
RNF135Q8IUD6 AC079089.2-201ENST00000531211 1277 ntBASIC22■■□□□ 1.11
RNF135Q8IUD6 AC053503.5-201ENST00000601508 636 ntBASIC22■■□□□ 1.11
RNF135Q8IUD6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22■■□□□ 1.11
RNF135Q8IUD6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22■■□□□ 1.11
RNF135Q8IUD6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
RNF135Q8IUD6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
RNF135Q8IUD6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF135Q8IUD6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 LINC00526-201ENST00000581067 1875 ntBASIC21.99■■□□□ 1.11
RNF135Q8IUD6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF135Q8IUD6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 AL162412.1-201ENST00000567129 965 ntBASIC21.98■■□□□ 1.11
RNF135Q8IUD6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 AL591742.1-201ENST00000604433 565 ntBASIC21.98■■□□□ 1.11
RNF135Q8IUD6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF135Q8IUD6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms