Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 ID1-201ENST00000376105 1233 ntBASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 AC069236.1-201ENST00000604339 616 ntBASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 AL121832.2-201ENST00000610979 668 ntBASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 AC008694.1-202ENST00000636953 945 ntBASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRRTM4Q86VH4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRTM4Q86VH4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRRTM4Q86VH4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRRTM4Q86VH4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.43■□□□□ 0.86
LRRTM4Q86VH4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.43■□□□□ 0.86
LRRTM4Q86VH4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRTM4Q86VH4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.43■□□□□ 0.86
LRRTM4Q86VH4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRTM4Q86VH4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
LRRTM4Q86VH4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
LRRTM4Q86VH4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRTM4Q86VH4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRRTM4Q86VH4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 GPX1P1-201ENST00000388829 606 ntBASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 CDV3P1-201ENST00000471403 739 ntBASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 AC133552.2-202ENST00000575694 574 ntBASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LRRTM4Q86VH4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 HLA-L-209ENST00000420110 1011 ntBASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 AF201337.1-201ENST00000520239 748 ntBASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRTM4Q86VH4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 AC083906.2-201ENST00000511578 360 ntBASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 AL109923.1-201ENST00000618799 583 ntBASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 OR10C1-204ENST00000622521 1039 ntBASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LRRTM4Q86VH4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRTM4Q86VH4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRTM4Q86VH4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRTM4Q86VH4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.39■□□□□ 0.85
LRRTM4Q86VH4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.39■□□□□ 0.85
LRRTM4Q86VH4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms