Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LDB1Q86U70 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.74■□□□□ 0.91
LDB1Q86U70 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.74■□□□□ 0.91
LDB1Q86U70 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LDB1Q86U70 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LDB1Q86U70 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
LDB1Q86U70 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.74■□□□□ 0.91
LDB1Q86U70 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDB1Q86U70 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.74■□□□□ 0.91
LDB1Q86U70 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LDB1Q86U70 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.73■□□□□ 0.91
LDB1Q86U70 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDB1Q86U70 POU5F1P4-201ENST00000413175 1085 ntBASIC20.73■□□□□ 0.91
LDB1Q86U70 AC097381.1-201ENST00000429019 1296 ntBASIC20.73■□□□□ 0.91
LDB1Q86U70 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDB1Q86U70 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LDB1Q86U70 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.73■□□□□ 0.91
LDB1Q86U70 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.73■□□□□ 0.91
LDB1Q86U70 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.73■□□□□ 0.91
LDB1Q86U70 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.73■□□□□ 0.91
LDB1Q86U70 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LDB1Q86U70 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.73■□□□□ 0.91
LDB1Q86U70 AC019069.1-201ENST00000610008 1333 ntBASIC20.73■□□□□ 0.91
LDB1Q86U70 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.73■□□□□ 0.91
LDB1Q86U70 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDB1Q86U70 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LDB1Q86U70 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.72■□□□□ 0.91
LDB1Q86U70 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LDB1Q86U70 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
LDB1Q86U70 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LDB1Q86U70 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDB1Q86U70 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDB1Q86U70 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.72■□□□□ 0.91
LDB1Q86U70 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDB1Q86U70 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.72■□□□□ 0.91
LDB1Q86U70 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LDB1Q86U70 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDB1Q86U70 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDB1Q86U70 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDB1Q86U70 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LDB1Q86U70 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LDB1Q86U70 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.72■□□□□ 0.91
LDB1Q86U70 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.72■□□□□ 0.91
LDB1Q86U70 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDB1Q86U70 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LDB1Q86U70 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LDB1Q86U70 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDB1Q86U70 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDB1Q86U70 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LDB1Q86U70 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.71■□□□□ 0.91
LDB1Q86U70 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LDB1Q86U70 AC121338.2-201ENST00000622535 1744 ntBASIC20.71■□□□□ 0.91
LDB1Q86U70 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.71■□□□□ 0.91
LDB1Q86U70 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LDB1Q86U70 MIR6821-201ENST00000617625 74 ntBASIC20.71■□□□□ 0.91
LDB1Q86U70 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDB1Q86U70 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDB1Q86U70 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LDB1Q86U70 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.7■□□□□ 0.91
LDB1Q86U70 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
LDB1Q86U70 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LDB1Q86U70 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LDB1Q86U70 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LDB1Q86U70 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LDB1Q86U70 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.7■□□□□ 0.9
LDB1Q86U70 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LDB1Q86U70 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LDB1Q86U70 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LDB1Q86U70 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.7■□□□□ 0.9
LDB1Q86U70 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.7■□□□□ 0.9
LDB1Q86U70 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.7■□□□□ 0.9
LDB1Q86U70 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.7■□□□□ 0.9
LDB1Q86U70 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LDB1Q86U70 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LDB1Q86U70 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LDB1Q86U70 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.7■□□□□ 0.9
LDB1Q86U70 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
LDB1Q86U70 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.69■□□□□ 0.9
LDB1Q86U70 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LDB1Q86U70 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LDB1Q86U70 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
LDB1Q86U70 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDB1Q86U70 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LDB1Q86U70 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LDB1Q86U70 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDB1Q86U70 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDB1Q86U70 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
LDB1Q86U70 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.69■□□□□ 0.9
LDB1Q86U70 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LDB1Q86U70 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDB1Q86U70 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDB1Q86U70 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDB1Q86U70 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
LDB1Q86U70 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDB1Q86U70 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.68■□□□□ 0.9
LDB1Q86U70 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LDB1Q86U70 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LDB1Q86U70 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
LDB1Q86U70 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDB1Q86U70 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms