Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 OR7E47P-201ENST00000546390 1422 ntBASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 AC012414.1-201ENST00000556676 535 ntBASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 AL358852.1-201ENST00000623174 1268 ntBASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
RNF111Q6ZNA4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 AL354811.1-201ENST00000610286 706 ntBASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF111Q6ZNA4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 SMUG1P1-201ENST00000590640 811 ntBASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.12■□□□□ 0.81
RNF111Q6ZNA4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
RNF111Q6ZNA4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF111Q6ZNA4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF111Q6ZNA4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms