Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R3CPQ6ZMV5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R3CPQ6ZMV5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
PPP4R3CPQ6ZMV5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 CAB39P1-201ENST00000502277 460 ntBASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 AC022517.1-201ENST00000592429 346 ntBASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC23.62■■□□□ 1.37
PPP4R3CPQ6ZMV5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3CPQ6ZMV5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4R3CPQ6ZMV5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4R3CPQ6ZMV5 CLDN5-201ENST00000403084 2357 ntBASIC23.6■■□□□ 1.37
PPP4R3CPQ6ZMV5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4R3CPQ6ZMV5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
PPP4R3CPQ6ZMV5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.6■■□□□ 1.37
PPP4R3CPQ6ZMV5 ELL2P2-201ENST00000515135 694 ntBASIC23.6■■□□□ 1.37
PPP4R3CPQ6ZMV5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.6■■□□□ 1.37
PPP4R3CPQ6ZMV5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.6■■□□□ 1.37
PPP4R3CPQ6ZMV5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.6■■□□□ 1.37
PPP4R3CPQ6ZMV5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PPP4R3CPQ6ZMV5 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4R3CPQ6ZMV5 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC23.6■■□□□ 1.37
PPP4R3CPQ6ZMV5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R3CPQ6ZMV5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PPP4R3CPQ6ZMV5 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R3CPQ6ZMV5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.59■■□□□ 1.37
PPP4R3CPQ6ZMV5 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC23.59■■□□□ 1.37
PPP4R3CPQ6ZMV5 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC23.59■■□□□ 1.37
PPP4R3CPQ6ZMV5 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC23.59■■□□□ 1.37
PPP4R3CPQ6ZMV5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.59■■□□□ 1.37
PPP4R3CPQ6ZMV5 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC23.59■■□□□ 1.37
PPP4R3CPQ6ZMV5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R3CPQ6ZMV5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R3CPQ6ZMV5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.59■■□□□ 1.37
PPP4R3CPQ6ZMV5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R3CPQ6ZMV5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R3CPQ6ZMV5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 AC244015.2-201ENST00000616358 1861 ntBASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 AP004607.7-201ENST00000527152 1677 ntBASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 AP004607.4-201ENST00000530158 1459 ntBASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 AC055733.4-201ENST00000638462 1354 ntBASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 MTCYBP15-201ENST00000433123 1127 ntBASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 HLA-F-220ENST00000434407 884 ntBASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 MTND1P26-201ENST00000440488 538 ntBASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 AC005534.1-201ENST00000455709 742 ntTSL 2 BASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 AC018635.1-201ENST00000468292 1030 ntBASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 AC114322.1-201ENST00000506771 926 ntBASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 AC023510.2-201ENST00000622162 746 ntBASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.58■■□□□ 1.37
PPP4R3CPQ6ZMV5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.58■■□□□ 1.36
PPP4R3CPQ6ZMV5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PPP4R3CPQ6ZMV5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PPP4R3CPQ6ZMV5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.58■■□□□ 1.36
PPP4R3CPQ6ZMV5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.57■■□□□ 1.36
PPP4R3CPQ6ZMV5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PPP4R3CPQ6ZMV5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R3CPQ6ZMV5 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R3CPQ6ZMV5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PPP4R3CPQ6ZMV5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R3CPQ6ZMV5 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.57■■□□□ 1.36
PPP4R3CPQ6ZMV5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.57■■□□□ 1.36
PPP4R3CPQ6ZMV5 ATG10-IT1-201ENST00000396880 487 ntBASIC23.57■■□□□ 1.36
PPP4R3CPQ6ZMV5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
PPP4R3CPQ6ZMV5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
PPP4R3CPQ6ZMV5 AL022319.1-201ENST00000458183 1167 ntBASIC23.57■■□□□ 1.36
PPP4R3CPQ6ZMV5 TRIM36-IT1-201ENST00000503723 881 ntBASIC23.57■■□□□ 1.36
PPP4R3CPQ6ZMV5 AC079140.4-201ENST00000507448 529 ntBASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms