Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DCLRE1AQ6PJP8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DCLRE1AQ6PJP8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.27■■□□□ 1.16
DCLRE1AQ6PJP8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
DCLRE1AQ6PJP8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.27■■□□□ 1.16
DCLRE1AQ6PJP8 MYC-209ENST00000641252 345 ntBASIC22.27■■□□□ 1.16
DCLRE1AQ6PJP8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DCLRE1AQ6PJP8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
DCLRE1AQ6PJP8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
DCLRE1AQ6PJP8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
DCLRE1AQ6PJP8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
DCLRE1AQ6PJP8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
DCLRE1AQ6PJP8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 LSM12P1-201ENST00000411836 588 ntBASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 AC091874.3-201ENST00000512672 1195 ntBASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DCLRE1AQ6PJP8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DCLRE1AQ6PJP8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
DCLRE1AQ6PJP8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
DCLRE1AQ6PJP8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.25■■□□□ 1.15
DCLRE1AQ6PJP8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.25■■□□□ 1.15
DCLRE1AQ6PJP8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
DCLRE1AQ6PJP8 AC007322.3-201ENST00000426526 701 ntBASIC22.25■■□□□ 1.15
DCLRE1AQ6PJP8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.25■■□□□ 1.15
DCLRE1AQ6PJP8 AC093827.2-201ENST00000512654 315 ntBASIC22.25■■□□□ 1.15
DCLRE1AQ6PJP8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DCLRE1AQ6PJP8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DCLRE1AQ6PJP8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DCLRE1AQ6PJP8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 AL355472.2-201ENST00000422958 438 ntBASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 DUSP5P2-201ENST00000426873 1033 ntBASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 AC083880.1-201ENST00000608266 535 ntBASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.24■■□□□ 1.15
DCLRE1AQ6PJP8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 RNA5SP413-201ENST00000516373 109 ntBASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 CYP2T3P-201ENST00000601990 817 ntBASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DCLRE1AQ6PJP8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 MCRIP2P1-201ENST00000394346 511 ntBASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms