Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC26.6■■□□□ 1.85
CCDC30Q5VVM6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
CCDC30Q5VVM6 SLC29A4P1-201ENST00000398760 971 ntBASIC26.59■■□□□ 1.85
CCDC30Q5VVM6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC30Q5VVM6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.59■■□□□ 1.85
CCDC30Q5VVM6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.59■■□□□ 1.85
CCDC30Q5VVM6 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.59■■□□□ 1.85
CCDC30Q5VVM6 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.59■■□□□ 1.85
CCDC30Q5VVM6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC30Q5VVM6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC30Q5VVM6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 AL355802.2-201ENST00000402069 882 ntBASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 AC142086.2-201ENST00000569753 217 ntBASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.58■■□□□ 1.85
CCDC30Q5VVM6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.58■■□□□ 1.84
CCDC30Q5VVM6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.84
CCDC30Q5VVM6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 MKRN4P-201ENST00000444706 1521 ntBASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 SAPCD2P1-201ENST00000395413 1184 ntBASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 AC007322.3-201ENST00000426526 701 ntBASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC30Q5VVM6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC30Q5VVM6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC30Q5VVM6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
CCDC30Q5VVM6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC30Q5VVM6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
CCDC30Q5VVM6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC26.56■■□□□ 1.84
CCDC30Q5VVM6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.56■■□□□ 1.84
CCDC30Q5VVM6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC30Q5VVM6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC30Q5VVM6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 AC116050.2-201ENST00000612102 1779 ntBASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 AC010980.2-201ENST00000587099 1412 ntBASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC30Q5VVM6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC30Q5VVM6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC30Q5VVM6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
CCDC30Q5VVM6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC26.54■■□□□ 1.84
CCDC30Q5VVM6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.54■■□□□ 1.84
CCDC30Q5VVM6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
CCDC30Q5VVM6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
CCDC30Q5VVM6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC30Q5VVM6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC30Q5VVM6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC30Q5VVM6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC30Q5VVM6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC30Q5VVM6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 AL138781.1-201ENST00000566567 1274 ntBASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC26.53■■□□□ 1.84
CCDC30Q5VVM6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms