Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI3Q3KNW1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.02■□□□□ 0.48
SNAI3Q3KNW1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI3Q3KNW1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
SNAI3Q3KNW1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.02■□□□□ 0.48
SNAI3Q3KNW1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.02■□□□□ 0.48
SNAI3Q3KNW1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI3Q3KNW1 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.02■□□□□ 0.48
SNAI3Q3KNW1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.02■□□□□ 0.48
SNAI3Q3KNW1 AP001160.3-201ENST00000601484 763 ntBASIC18.02■□□□□ 0.48
SNAI3Q3KNW1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI3Q3KNW1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNAI3Q3KNW1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNAI3Q3KNW1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 KRT18P61-201ENST00000585825 1298 ntBASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI3Q3KNW1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
SNAI3Q3KNW1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SNAI3Q3KNW1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
SNAI3Q3KNW1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18■□□□□ 0.47
SNAI3Q3KNW1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SNAI3Q3KNW1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18■□□□□ 0.47
SNAI3Q3KNW1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18■□□□□ 0.47
SNAI3Q3KNW1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18■□□□□ 0.47
SNAI3Q3KNW1 SLC7A5P2-201ENST00000553010 536 ntBASIC18■□□□□ 0.47
SNAI3Q3KNW1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18■□□□□ 0.47
SNAI3Q3KNW1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SNAI3Q3KNW1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SNAI3Q3KNW1 KRT16P2-201ENST00000414673 1423 ntBASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 AC120498.10-201ENST00000621827 505 ntBASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNAI3Q3KNW1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 RARRES2P11-201ENST00000635158 484 ntBASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNAI3Q3KNW1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms