Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 KRT18P68-201ENST00000392293 1000 ntBASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 AL355355.2-201ENST00000442321 338 ntBASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 CDV3P1-201ENST00000471403 739 ntBASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RSPO4Q2I0M5 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RSPO4Q2I0M5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RSPO4Q2I0M5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.28■□□□□ 0.84
RSPO4Q2I0M5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RSPO4Q2I0M5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RSPO4Q2I0M5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.27■□□□□ 0.83
RSPO4Q2I0M5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 AC113347.1-201ENST00000413321 391 ntBASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RSPO4Q2I0M5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 AC061975.6-201ENST00000579045 1553 ntBASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RSPO4Q2I0M5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 AC091799.1-201ENST00000422823 811 ntBASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RSPO4Q2I0M5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RSPO4Q2I0M5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RSPO4Q2I0M5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms