Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH17Q12864 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
CDH17Q12864 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CDH17Q12864 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH17Q12864 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH17Q12864 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH17Q12864 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH17Q12864 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH17Q12864 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.99■□□□□ 0.95
CDH17Q12864 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH17Q12864 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH17Q12864 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH17Q12864 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH17Q12864 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH17Q12864 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH17Q12864 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH17Q12864 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH17Q12864 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CDH17Q12864 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.99■□□□□ 0.95
CDH17Q12864 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH17Q12864 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH17Q12864 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH17Q12864 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH17Q12864 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH17Q12864 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
CDH17Q12864 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH17Q12864 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH17Q12864 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH17Q12864 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH17Q12864 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.98■□□□□ 0.95
CDH17Q12864 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH17Q12864 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.98■□□□□ 0.95
CDH17Q12864 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.98■□□□□ 0.95
CDH17Q12864 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH17Q12864 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH17Q12864 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH17Q12864 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.98■□□□□ 0.95
CDH17Q12864 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH17Q12864 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDH17Q12864 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDH17Q12864 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH17Q12864 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH17Q12864 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH17Q12864 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH17Q12864 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CDH17Q12864 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.97■□□□□ 0.95
CDH17Q12864 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH17Q12864 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH17Q12864 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH17Q12864 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH17Q12864 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH17Q12864 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.97■□□□□ 0.95
CDH17Q12864 AP001160.3-201ENST00000601484 763 ntBASIC20.97■□□□□ 0.95
CDH17Q12864 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH17Q12864 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CDH17Q12864 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH17Q12864 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
CDH17Q12864 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH17Q12864 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH17Q12864 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.96■□□□□ 0.95
CDH17Q12864 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH17Q12864 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.96■□□□□ 0.95
CDH17Q12864 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH17Q12864 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.96■□□□□ 0.95
CDH17Q12864 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH17Q12864 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH17Q12864 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.96■□□□□ 0.95
CDH17Q12864 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH17Q12864 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH17Q12864 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH17Q12864 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
CDH17Q12864 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH17Q12864 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH17Q12864 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH17Q12864 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH17Q12864 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH17Q12864 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH17Q12864 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH17Q12864 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH17Q12864 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH17Q12864 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH17Q12864 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH17Q12864 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH17Q12864 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH17Q12864 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH17Q12864 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH17Q12864 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH17Q12864 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH17Q12864 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH17Q12864 AL157384.1-201ENST00000445995 2473 ntBASIC20.95■□□□□ 0.94
CDH17Q12864 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH17Q12864 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH17Q12864 AC011484.1-201ENST00000377652 1995 ntBASIC20.94■□□□□ 0.94
CDH17Q12864 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH17Q12864 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDH17Q12864 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDH17Q12864 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CDH17Q12864 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CDH17Q12864 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CDH17Q12864 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms