Protein–RNA interactions for Protein: Q08954

YPL199C, Smr domain-containing protein YPL199C, yeastyeast

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPL199CQ08954 NEL1YHR035W 1893 nt2.77□□□□□ -1.97
YPL199CQ08954 CEP3YMR168C 1827 nt2.77□□□□□ -1.97
YPL199CQ08954 MPS1YDL028C 2295 nt2.76□□□□□ -1.97
YPL199CQ08954 15S_rRNA15S_rRNA 1649 nt2.76□□□□□ -1.97
YPL199CQ08954 SNA4YDL123W 423 nt2.76□□□□□ -1.97
YPL199CQ08954 snR84snR84 550 nt2.76□□□□□ -1.97
YPL199CQ08954 NCB2YDR397C 441 nt2.76□□□□□ -1.97
YPL199CQ08954 MIC19YFR011C 513 nt2.76□□□□□ -1.97
YPL199CQ08954 RPB9YGL070C 369 nt2.76□□□□□ -1.97
YPL199CQ08954 SDL1YIL167W 633 nt2.76□□□□□ -1.97
YPL199CQ08954 YIR020C-BYIR020C-B 735 nt2.76□□□□□ -1.97
YPL199CQ08954 YBR051WYBR051W 351 nt2.76□□□□□ -1.97
YPL199CQ08954 JID1YPR061C 906 nt2.76□□□□□ -1.97
YPL199CQ08954 FLO5YHR211W 3228 nt2.76□□□□□ -1.97
YPL199CQ08954 SHE9YDR393W 1371 nt2.75□□□□□ -1.97
YPL199CQ08954 CBP2YHL038C 1893 nt2.75□□□□□ -1.97
YPL199CQ08954 FRE8YLR047C 2061 nt2.75□□□□□ -1.97
YPL199CQ08954 YDL187CYDL187C 330 nt2.75□□□□□ -1.97
YPL199CQ08954 YDR115WYDR115W 318 nt2.75□□□□□ -1.97
YPL199CQ08954 VMA8YEL051W 771 nt2.75□□□□□ -1.97
YPL199CQ08954 TDA2YER071C 381 nt2.75□□□□□ -1.97
YPL199CQ08954 SLX9YGR081C 633 nt2.75□□□□□ -1.97
YPL199CQ08954 YHR213WYHR213W 597 nt2.75□□□□□ -1.97
YPL199CQ08954 YKR051WYKR051W 1257 nt2.75□□□□□ -1.97
YPL199CQ08954 TDA8YAL064C-A 381 nt2.75□□□□□ -1.97
YPL199CQ08954 YAR062WYAR062W 597 nt2.75□□□□□ -1.97
YPL199CQ08954 ATP18YML081C-A 180 nt2.75□□□□□ -1.97
YPL199CQ08954 ADI1YMR009W 540 nt2.75□□□□□ -1.97
YPL199CQ08954 PFY1YOR122C 381 nt2.75□□□□□ -1.97
YPL199CQ08954 TRS20YBR254C 528 nt2.75□□□□□ -1.97
YPL199CQ08954 HBT1YDL223C 3141 nt2.75□□□□□ -1.97
YPL199CQ08954 ADY4YLR227C 1482 nt2.75□□□□□ -1.97
YPL199CQ08954 ESL1YIL151C 3357 nt2.75□□□□□ -1.97
YPL199CQ08954 PUF6YDR496C 1971 nt2.74□□□□□ -1.97
YPL199CQ08954 RIM13YMR154C 2184 nt2.74□□□□□ -1.97
YPL199CQ08954 SHQ1YIL104C 1524 nt2.74□□□□□ -1.97
YPL199CQ08954 CHS3YBR023C 3498 nt2.74□□□□□ -1.97
YPL199CQ08954 MSH2YOL090W 2895 nt2.74□□□□□ -1.97
YPL199CQ08954 YBR259WYBR259W 2067 nt2.74□□□□□ -1.97
YPL199CQ08954 SHS1YDL225W 1656 nt2.74□□□□□ -1.97
YPL199CQ08954 NCS2YNL119W 1482 nt2.74□□□□□ -1.97
YPL199CQ08954 MPO1YGL010W 525 nt2.74□□□□□ -1.97
YPL199CQ08954 LRP1YHR081W 555 nt2.74□□□□□ -1.97
YPL199CQ08954 ACF4YJR083C 930 nt2.74□□□□□ -1.97
YPL199CQ08954 RBL2YOR265W 321 nt2.74□□□□□ -1.97
YPL199CQ08954 YPL142CYPL142C 318 nt2.74□□□□□ -1.97
YPL199CQ08954 NTC20YBR188C 423 nt2.74□□□□□ -1.97
YPL199CQ08954 AIM4YBR194W 372 nt2.74□□□□□ -1.97
YPL199CQ08954 YNR063WYNR063W 1824 nt2.74□□□□□ -1.97
YPL199CQ08954 RSN1YMR266W 2862 nt2.74□□□□□ -1.97
YPL199CQ08954 FRE2YKL220C 2136 nt2.74□□□□□ -1.97
YPL199CQ08954 SPP382YLR424W 2127 nt2.74□□□□□ -1.97
YPL199CQ08954 YJL132WYJL132W 2253 nt2.73□□□□□ -1.97
YPL199CQ08954 YGL063C-AYGL063C-A 150 nt2.73□□□□□ -1.97
YPL199CQ08954 YAL031W-AYAL031W-A 309 nt2.73□□□□□ -1.97
YPL199CQ08954 RPL16BYNL069C 597 nt2.73□□□□□ -1.97
YPL199CQ08954 NDT80YHR124W 1884 nt2.73□□□□□ -1.97
YPL199CQ08954 NOP4YPL043W 2058 nt2.72□□□□□ -1.97
YPL199CQ08954 MTC7YEL033W 420 nt2.72□□□□□ -1.97
YPL199CQ08954 tQ(UUG)BtQ(UUG)B 72 nt2.72□□□□□ -1.97
YPL199CQ08954 YGR228WYGR228W 345 nt2.72□□□□□ -1.97
YPL199CQ08954 SCEIQ0160 708 nt2.72□□□□□ -1.97
YPL199CQ08954 SRL3YKR091W 741 nt2.72□□□□□ -1.97
YPL199CQ08954 YLR076CYLR076C 423 nt2.72□□□□□ -1.97
YPL199CQ08954 RPS16AYMR143W 432 nt2.72□□□□□ -1.97
YPL199CQ08954 SWS2YNL081C 432 nt2.72□□□□□ -1.97
YPL199CQ08954 YOL013W-BYOL013W-B 291 nt2.72□□□□□ -1.97
YPL199CQ08954 TPK2YPL203W 1143 nt2.72□□□□□ -1.97
YPL199CQ08954 CDC20YGL116W 1833 nt2.72□□□□□ -1.97
YPL199CQ08954 REG1YDR028C 3045 nt2.71□□□□□ -1.97
YPL199CQ08954 RPN3YER021W 1572 nt2.71□□□□□ -1.98
YPL199CQ08954 snR59snR59 78 nt2.71□□□□□ -1.98
YPL199CQ08954 PNC1YGL037C 651 nt2.71□□□□□ -1.98
YPL199CQ08954 BET4YJL031C 984 nt2.71□□□□□ -1.98
YPL199CQ08954 YJL169WYJL169W 369 nt2.71□□□□□ -1.98
YPL199CQ08954 YLR257WYLR257W 966 nt2.71□□□□□ -1.98
YPL199CQ08954 YNL150WYNL150W 408 nt2.71□□□□□ -1.98
YPL199CQ08954 MRPL40YPL173W 894 nt2.71□□□□□ -1.98
YPL199CQ08954 NMD2YHR077C 3270 nt2.71□□□□□ -1.98
YPL199CQ08954 UTP15YMR093W 1542 nt2.71□□□□□ -1.98
YPL199CQ08954 PDS5YMR076C 3834 nt2.71□□□□□ -1.98
YPL199CQ08954 AFR1YDR085C 1863 nt2.71□□□□□ -1.98
YPL199CQ08954 SMC2YFR031C 3513 nt2.71□□□□□ -1.98
YPL199CQ08954 GAL80YML051W 1308 nt2.7□□□□□ -1.98
YPL199CQ08954 MET5YJR137C 4329 nt2.7□□□□□ -1.98
YPL199CQ08954 PFF1YBR074W 2931 nt2.7□□□□□ -1.98
YPL199CQ08954 GYL1YMR192W 2163 nt2.7□□□□□ -1.98
YPL199CQ08954 YGR027W-BYGR027W-B 5268 nt2.7□□□□□ -1.98
YPL199CQ08954 YLR227W-BYLR227W-B 5268 nt2.7□□□□□ -1.98
YPL199CQ08954 YPR158C-DYPR158C-D 5268 nt2.7□□□□□ -1.98
YPL199CQ08954 YNL193WYNL193W 1677 nt2.7□□□□□ -1.98
YPL199CQ08954 SWC4YGR002C 1431 nt2.7□□□□□ -1.98
YPL199CQ08954 21S_rRNA21S_rRNA 3296 nt2.7□□□□□ -1.98
YPL199CQ08954 YTA7YGR270W 4140 nt2.7□□□□□ -1.98
YPL199CQ08954 YCG1YDR325W 3108 nt2.7□□□□□ -1.98
YPL199CQ08954 FIN1YDR130C 876 nt2.7□□□□□ -1.98
YPL199CQ08954 YER066C-AYER066C-A 501 nt2.7□□□□□ -1.98
YPL199CQ08954 tK(UUU)DtK(UUU)D 73 nt2.7□□□□□ -1.98
YPL199CQ08954 tK(UUU)G1tK(UUU)G1 73 nt2.7□□□□□ -1.98
YPL199CQ08954 tK(UUU)G2tK(UUU)G2 73 nt2.7□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 21.3 ms