Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 ESF2YNR054C 951 nt1.77□□□□□ -2.13
HRD1Q08109 ARR2YPR200C 393 nt1.77□□□□□ -2.13
HRD1Q08109 HRD3YLR207W 2502 nt1.77□□□□□ -2.13
HRD1Q08109 YCR015CYCR015C 954 nt1.76□□□□□ -2.13
HRD1Q08109 YER119C-AYER119C-A 372 nt1.76□□□□□ -2.13
HRD1Q08109 MPS2YGL075C 1164 nt1.76□□□□□ -2.13
HRD1Q08109 MRM2YGL136C 963 nt1.76□□□□□ -2.13
HRD1Q08109 YPS5YGL259W 498 nt1.76□□□□□ -2.13
HRD1Q08109 RTS3YGR161C 792 nt1.76□□□□□ -2.13
HRD1Q08109 AIM19YIL087C 474 nt1.76□□□□□ -2.13
HRD1Q08109 ASG7YJL170C 630 nt1.76□□□□□ -2.13
HRD1Q08109 YLR224WYLR224W 1110 nt1.76□□□□□ -2.13
HRD1Q08109 SRT1YMR101C 1032 nt1.76□□□□□ -2.13
HRD1Q08109 DIS3YOL021C 3006 nt1.76□□□□□ -2.13
HRD1Q08109 YCT1YLL055W 1596 nt1.76□□□□□ -2.13
HRD1Q08109 MSL5YLR116W 1431 nt1.75□□□□□ -2.13
HRD1Q08109 ALK2YBL009W 2031 nt1.75□□□□□ -2.13
HRD1Q08109 APC11YDL008W 498 nt1.75□□□□□ -2.13
HRD1Q08109 RPA12YJR063W 378 nt1.75□□□□□ -2.13
HRD1Q08109 YKL069WYKL069W 543 nt1.75□□□□□ -2.13
HRD1Q08109 VPH2YKL119C 648 nt1.75□□□□□ -2.13
HRD1Q08109 RRP12YPL012W 3687 nt1.75□□□□□ -2.13
HRD1Q08109 PUT3YKL015W 2940 nt1.75□□□□□ -2.13
HRD1Q08109 RPL35BYDL136W 363 nt1.74□□□□□ -2.13
HRD1Q08109 AAD16YFL057C 459 nt1.74□□□□□ -2.13
HRD1Q08109 YLR257WYLR257W 966 nt1.74□□□□□ -2.13
HRD1Q08109 DPB3YBR278W 606 nt1.74□□□□□ -2.13
HRD1Q08109 LRE1YCL051W 1752 nt1.74□□□□□ -2.13
HRD1Q08109 APC2YLR127C 2562 nt1.74□□□□□ -2.13
HRD1Q08109 RTG3YBL103C 1461 nt1.74□□□□□ -2.13
HRD1Q08109 DFG16YOR030W 1860 nt1.73□□□□□ -2.13
HRD1Q08109 WHI3YNL197C 1986 nt1.73□□□□□ -2.13
HRD1Q08109 UBC13YDR092W 462 nt1.73□□□□□ -2.13
HRD1Q08109 FMN1YDR236C 657 nt1.73□□□□□ -2.13
HRD1Q08109 VTC1YER072W 390 nt1.73□□□□□ -2.13
HRD1Q08109 RPS24AYER074W 408 nt1.73□□□□□ -2.13
HRD1Q08109 SAE2YGL175C 1038 nt1.73□□□□□ -2.13
HRD1Q08109 RPS25AYGR027C 327 nt1.73□□□□□ -2.13
HRD1Q08109 RGI2YIL057C 495 nt1.73□□□□□ -2.13
HRD1Q08109 YLR154W-AYLR154W-A 186 nt1.73□□□□□ -2.13
HRD1Q08109 UTP5YDR398W 1932 nt1.73□□□□□ -2.13
HRD1Q08109 FAB1YFR019W 6837 nt1.73□□□□□ -2.13
HRD1Q08109 NPR3YHL023C 3441 nt1.73□□□□□ -2.13
HRD1Q08109 IST2YBR086C 2841 nt1.72□□□□□ -2.13
HRD1Q08109 SLF1YDR515W 1344 nt1.72□□□□□ -2.13
HRD1Q08109 NOP56YLR197W 1515 nt1.72□□□□□ -2.13
HRD1Q08109 INP53YOR109W 3324 nt1.72□□□□□ -2.13
HRD1Q08109 MYO4YAL029C 4416 nt1.72□□□□□ -2.13
HRD1Q08109 YDL118WYDL118W 381 nt1.72□□□□□ -2.13
HRD1Q08109 PET100YDR079W 336 nt1.72□□□□□ -2.13
HRD1Q08109 RAV2YDR202C 1056 nt1.72□□□□□ -2.13
HRD1Q08109 SPT15YER148W 723 nt1.72□□□□□ -2.13
HRD1Q08109 YFH7YFR007W 1062 nt1.72□□□□□ -2.13
HRD1Q08109 RPS22BYLR367W 393 nt1.72□□□□□ -2.13
HRD1Q08109 YBL012CYBL012C 402 nt1.72□□□□□ -2.13
HRD1Q08109 YNL162W-AYNL162W-A 219 nt1.72□□□□□ -2.13
HRD1Q08109 SEC66YBR171W 621 nt1.72□□□□□ -2.13
HRD1Q08109 CTP1YBR291C 900 nt1.72□□□□□ -2.13
HRD1Q08109 ERT1YBR239C 1590 nt1.72□□□□□ -2.13
HRD1Q08109 GIS1YDR096W 2685 nt1.72□□□□□ -2.13
HRD1Q08109 FIG2YCR089W 4830 nt1.71□□□□□ -2.13
HRD1Q08109 RNH70YGR276C 1662 nt1.71□□□□□ -2.14
HRD1Q08109 YCR081C-AYCR081C-A 237 nt1.71□□□□□ -2.14
HRD1Q08109 EMI1YDR512C 564 nt1.71□□□□□ -2.14
HRD1Q08109 DDI2YFL061W 678 nt1.71□□□□□ -2.14
HRD1Q08109 YHR210CYHR210C 1026 nt1.71□□□□□ -2.14
HRD1Q08109 YIL046W-AYIL046W-A 165 nt1.71□□□□□ -2.14
HRD1Q08109 YLR311CYLR311C 348 nt1.71□□□□□ -2.14
HRD1Q08109 PRM4YPL156C 855 nt1.71□□□□□ -2.14
HRD1Q08109 YBR201C-AYBR201C-A 204 nt1.71□□□□□ -2.14
HRD1Q08109 GDI1YER136W 1356 nt1.71□□□□□ -2.14
HRD1Q08109 DNF3YMR162C 4971 nt1.7□□□□□ -2.14
HRD1Q08109 YNR066CYNR066C 1311 nt1.7□□□□□ -2.14
HRD1Q08109 POM152YMR129W 4014 nt1.7□□□□□ -2.14
HRD1Q08109 snR76snR76 109 nt1.7□□□□□ -2.14
HRD1Q08109 RPS17BYDR447C 411 nt1.7□□□□□ -2.14
HRD1Q08109 ERG28YER044C 447 nt1.7□□□□□ -2.14
HRD1Q08109 YER172C-AYER172C-A 381 nt1.7□□□□□ -2.14
HRD1Q08109 YGL006W-AYGL006W-A 111 nt1.7□□□□□ -2.14
HRD1Q08109 COX13YGL191W 390 nt1.7□□□□□ -2.14
HRD1Q08109 VEL1YGL258W 621 nt1.7□□□□□ -2.14
HRD1Q08109 YPP1YGR198W 2454 nt1.7□□□□□ -2.14
HRD1Q08109 LHS1YKL073W 2646 nt1.7□□□□□ -2.14
HRD1Q08109 MUB1YMR100W 1863 nt1.7□□□□□ -2.14
HRD1Q08109 GPI2YPL076W 843 nt1.7□□□□□ -2.14
HRD1Q08109 SIR4YDR227W 4077 nt1.7□□□□□ -2.14
HRD1Q08109 SSY1YDR160W 2559 nt1.69□□□□□ -2.14
HRD1Q08109 PIB1YDR313C 861 nt1.69□□□□□ -2.14
HRD1Q08109 YHL044WYHL044W 708 nt1.69□□□□□ -2.14
HRD1Q08109 PCL5YHR071W 690 nt1.69□□□□□ -2.14
HRD1Q08109 TMA7YLR262C-A 195 nt1.69□□□□□ -2.14
HRD1Q08109 RPL6BYLR448W 531 nt1.69□□□□□ -2.14
HRD1Q08109 YMR247W-AYMR247W-A 144 nt1.69□□□□□ -2.14
HRD1Q08109 DUG3YNL191W 1074 nt1.69□□□□□ -2.14
HRD1Q08109 TEX1YNL253W 1269 nt1.69□□□□□ -2.14
HRD1Q08109 YOR277CYOR277C 309 nt1.69□□□□□ -2.14
HRD1Q08109 REG2YBR050C 1017 nt1.69□□□□□ -2.14
HRD1Q08109 YRO2YBR054W 1035 nt1.69□□□□□ -2.14
HRD1Q08109 CDC60YPL160W 3273 nt1.69□□□□□ -2.14
HRD1Q08109 BRE5YNR051C 1548 nt1.69□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms