Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 ARO80YDR421W 2853 nt3.85□□□□□ -1.79
SSL1Q04673 KIN4YOR233W 2403 nt3.85□□□□□ -1.79
SSL1Q04673 EMC1YCL045C 2283 nt3.84□□□□□ -1.79
SSL1Q04673 APL4YPR029C 2499 nt3.84□□□□□ -1.79
SSL1Q04673 YDR230WYDR230W 348 nt3.84□□□□□ -1.79
SSL1Q04673 ISA1YLL027W 753 nt3.84□□□□□ -1.79
SSL1Q04673 YMR141CYMR141C 309 nt3.84□□□□□ -1.79
SSL1Q04673 YBR012W-AYBR012W-A 1323 nt3.84□□□□□ -1.79
SSL1Q04673 YOR142W-AYOR142W-A 1323 nt3.84□□□□□ -1.79
SSL1Q04673 YPR158W-AYPR158W-A 1323 nt3.84□□□□□ -1.79
SSL1Q04673 CDC40YDR364C 1368 nt3.84□□□□□ -1.79
SSL1Q04673 ACE2YLR131C 2313 nt3.84□□□□□ -1.79
SSL1Q04673 POL4YCR014C 1749 nt3.84□□□□□ -1.8
SSL1Q04673 IOC2YLR095C 2439 nt3.83□□□□□ -1.8
SSL1Q04673 AHC2YCR082W 387 nt3.83□□□□□ -1.8
SSL1Q04673 YDL009CYDL009C 324 nt3.83□□□□□ -1.8
SSL1Q04673 MVB12YGR206W 306 nt3.83□□□□□ -1.8
SSL1Q04673 TAF6YGL112C 1551 nt3.83□□□□□ -1.8
SSL1Q04673 BEM4YPL161C 1902 nt3.83□□□□□ -1.8
SSL1Q04673 REB1YBR049C 2433 nt3.83□□□□□ -1.8
SSL1Q04673 LOS1YKL205W 3303 nt3.83□□□□□ -1.8
SSL1Q04673 NCR1YPL006W 3513 nt3.83□□□□□ -1.8
SSL1Q04673 YBR225WYBR225W 2703 nt3.82□□□□□ -1.8
SSL1Q04673 FRE4YNR060W 2160 nt3.82□□□□□ -1.8
SSL1Q04673 UTP15YMR093W 1542 nt3.82□□□□□ -1.8
SSL1Q04673 TRX3YCR083W 384 nt3.82□□□□□ -1.8
SSL1Q04673 YCR090CYCR090C 549 nt3.82□□□□□ -1.8
SSL1Q04673 NBL1YHR199C-A 222 nt3.82□□□□□ -1.8
SSL1Q04673 ARV1YLR242C 966 nt3.82□□□□□ -1.8
SSL1Q04673 ILV5YLR355C 1188 nt3.82□□□□□ -1.8
SSL1Q04673 SPT16YGL207W 3108 nt3.82□□□□□ -1.8
SSL1Q04673 TIF4631YGR162W 2859 nt3.82□□□□□ -1.8
SSL1Q04673 VAC14YLR386W 2643 nt3.82□□□□□ -1.8
SSL1Q04673 ISM1YPL040C 3009 nt3.81□□□□□ -1.8
SSL1Q04673 SPE1YKL184W 1401 nt3.81□□□□□ -1.8
SSL1Q04673 HTA1YDR225W 399 nt3.81□□□□□ -1.8
SSL1Q04673 FMN1YDR236C 657 nt3.81□□□□□ -1.8
SSL1Q04673 ECO1YFR027W 846 nt3.81□□□□□ -1.8
SSL1Q04673 IGO2YHR132W-A 396 nt3.81□□□□□ -1.8
SSL1Q04673 YKL162C-AYKL162C-A 153 nt3.81□□□□□ -1.8
SSL1Q04673 RRT16YNL105W 429 nt3.81□□□□□ -1.8
SSL1Q04673 AAR2YBL074C 1068 nt3.81□□□□□ -1.8
SSL1Q04673 YOL114CYOL114C 609 nt3.81□□□□□ -1.8
SSL1Q04673 FSH3YOR280C 801 nt3.81□□□□□ -1.8
SSL1Q04673 YBR032WYBR032W 303 nt3.81□□□□□ -1.8
SSL1Q04673 YDR338CYDR338C 2088 nt3.8□□□□□ -1.8
SSL1Q04673 GPI1YGR216C 1830 nt3.8□□□□□ -1.8
SSL1Q04673 RPS14AYCR031C 414 nt3.8□□□□□ -1.8
SSL1Q04673 TWF1YGR080W 999 nt3.8□□□□□ -1.8
SSL1Q04673 YJR112W-AYJR112W-A 330 nt3.8□□□□□ -1.8
SSL1Q04673 YKL083WYKL083W 615 nt3.8□□□□□ -1.8
SSL1Q04673 PKR1YMR123W 369 nt3.8□□□□□ -1.8
SSL1Q04673 DYN3YMR299C 939 nt3.8□□□□□ -1.8
SSL1Q04673 PEP12YOR036W 867 nt3.8□□□□□ -1.8
SSL1Q04673 VID24YBR105C 1089 nt3.8□□□□□ -1.8
SSL1Q04673 YKL050CYKL050C 2769 nt3.8□□□□□ -1.8
SSL1Q04673 VAC8YEL013W 1737 nt3.8□□□□□ -1.8
SSL1Q04673 YNL193WYNL193W 1677 nt3.8□□□□□ -1.8
SSL1Q04673 ROD1YOR018W 2514 nt3.8□□□□□ -1.8
SSL1Q04673 USA1YML029W 2517 nt3.79□□□□□ -1.8
SSL1Q04673 YDR090CYDR090C 933 nt3.79□□□□□ -1.8
SSL1Q04673 YDR526CYDR526C 471 nt3.79□□□□□ -1.8
SSL1Q04673 CRG1YHR209W 876 nt3.79□□□□□ -1.8
SSL1Q04673 POG1YIL122W 1056 nt3.79□□□□□ -1.8
SSL1Q04673 YAL037WYAL037W 804 nt3.79□□□□□ -1.8
SSL1Q04673 RMP1YLR145W 606 nt3.79□□□□□ -1.8
SSL1Q04673 YLR269CYLR269C 351 nt3.79□□□□□ -1.8
SSL1Q04673 IRC16YPR038W 360 nt3.79□□□□□ -1.8
SSL1Q04673 ERB1YMR049C 2424 nt3.79□□□□□ -1.8
SSL1Q04673 SSE2YBR169C 2082 nt3.79□□□□□ -1.8
SSL1Q04673 YBR259WYBR259W 2067 nt3.79□□□□□ -1.8
SSL1Q04673 PCK1YKR097W 1650 nt3.78□□□□□ -1.8
SSL1Q04673 DBF20YPR111W 1695 nt3.78□□□□□ -1.8
SSL1Q04673 RPS8BYER102W 603 nt3.78□□□□□ -1.8
SSL1Q04673 DFG10YIL049W 762 nt3.78□□□□□ -1.8
SSL1Q04673 YAL063C-AYAL063C-A 291 nt3.78□□□□□ -1.8
SSL1Q04673 YNL146C-AYNL146C-A 195 nt3.78□□□□□ -1.8
SSL1Q04673 YPL038W-AYPL038W-A 192 nt3.78□□□□□ -1.8
SSL1Q04673 RRD2YPL152W 1077 nt3.78□□□□□ -1.8
SSL1Q04673 ATG2YNL242W 4779 nt3.78□□□□□ -1.8
SSL1Q04673 MSL5YLR116W 1431 nt3.78□□□□□ -1.8
SSL1Q04673 VHS3YOR054C 2025 nt3.77□□□□□ -1.81
SSL1Q04673 ULS1YOR191W 4860 nt3.77□□□□□ -1.81
SSL1Q04673 SDC1YDR469W 528 nt3.77□□□□□ -1.81
SSL1Q04673 PBA1YLR199C 831 nt3.77□□□□□ -1.81
SSL1Q04673 COX8YLR395C 237 nt3.77□□□□□ -1.81
SSL1Q04673 PDR17YNL264C 1053 nt3.77□□□□□ -1.81
SSL1Q04673 ALG8YOR067C 1734 nt3.77□□□□□ -1.81
SSL1Q04673 GPI10YGL142C 1851 nt3.77□□□□□ -1.81
SSL1Q04673 SRP68YPL243W 1800 nt3.77□□□□□ -1.81
SSL1Q04673 MSH4YFL003C 2637 nt3.76□□□□□ -1.81
SSL1Q04673 YCR022CYCR022C 345 nt3.76□□□□□ -1.81
SSL1Q04673 SNA4YDL123W 423 nt3.76□□□□□ -1.81
SSL1Q04673 YFR054CYFR054C 579 nt3.76□□□□□ -1.81
SSL1Q04673 BIO2YGR286C 1128 nt3.76□□□□□ -1.81
SSL1Q04673 RPB2YOR151C 3675 nt3.76□□□□□ -1.81
SSL1Q04673 IMD4YML056C 1575 nt3.76□□□□□ -1.81
SSL1Q04673 YCF1YDR135C 4548 nt3.76□□□□□ -1.81
SSL1Q04673 GDI1YER136W 1356 nt3.76□□□□□ -1.81
SSL1Q04673 PBS2YJL128C 2007 nt3.75□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms