Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 YPR096CYPR096C 303 nt4.29□□□□□ -1.72
UBP3Q01477 SHG1YBR258C 429 nt4.29□□□□□ -1.72
UBP3Q01477 SRP68YPL243W 1800 nt4.29□□□□□ -1.72
UBP3Q01477 DIT2YDR402C 1470 nt4.29□□□□□ -1.72
UBP3Q01477 PDR12YPL058C 4536 nt4.29□□□□□ -1.72
UBP3Q01477 SSF2YDR312W 1362 nt4.28□□□□□ -1.72
UBP3Q01477 YNR065CYNR065C 3351 nt4.28□□□□□ -1.72 RIP-Chip
UBP3Q01477 SMT3YDR510W 306 nt4.28□□□□□ -1.72
UBP3Q01477 YHL037CYHL037C 402 nt4.28□□□□□ -1.72
UBP3Q01477 LTP1YPR073C 486 nt4.28□□□□□ -1.72
UBP3Q01477 POL4YCR014C 1749 nt4.28□□□□□ -1.72
UBP3Q01477 VPS73YGL104C 1461 nt4.28□□□□□ -1.72
UBP3Q01477 SEN54YPL083C 1404 nt4.28□□□□□ -1.72
UBP3Q01477 GWT1YJL091C 1473 nt4.27□□□□□ -1.73
UBP3Q01477 YCR018C-AYCR018C-A 255 nt4.27□□□□□ -1.73
UBP3Q01477 YEL032C-AYEL032C-A 162 nt4.27□□□□□ -1.73
UBP3Q01477 RPL1BYGL135W 654 nt4.27□□□□□ -1.73
UBP3Q01477 YGR035CYGR035C 351 nt4.27□□□□□ -1.73
UBP3Q01477 YHR052W-AYHR052W-A 195 nt4.27□□□□□ -1.73
UBP3Q01477 YHR054W-AYHR054W-A 195 nt4.27□□□□□ -1.73
UBP3Q01477 YHR212CYHR212C 336 nt4.27□□□□□ -1.73
UBP3Q01477 YIL141WYIL141W 390 nt4.27□□□□□ -1.73
UBP3Q01477 UTP30YKR060W 825 nt4.27□□□□□ -1.73
UBP3Q01477 TDA8YAL064C-A 381 nt4.27□□□□□ -1.73
UBP3Q01477 IDP2YLR174W 1239 nt4.27□□□□□ -1.73
UBP3Q01477 YAR060CYAR060C 336 nt4.27□□□□□ -1.73
UBP3Q01477 RPL1AYPL220W 654 nt4.27□□□□□ -1.73 RIP-Chip
UBP3Q01477 MBA1YBR185C 837 nt4.27□□□□□ -1.73
UBP3Q01477 ATP25YMR098C 1839 nt4.27□□□□□ -1.73 RIP-Chip
UBP3Q01477 PHO81YGR233C 3537 nt4.27□□□□□ -1.73
UBP3Q01477 SRP72YPL210C 1923 nt4.27□□□□□ -1.73
UBP3Q01477 TOP1YOL006C 2310 nt4.26□□□□□ -1.73
UBP3Q01477 SLK19YOR195W 2466 nt4.26□□□□□ -1.73
UBP3Q01477 YCR045W-AYCR045W-A 351 nt4.26□□□□□ -1.73
UBP3Q01477 AHC2YCR082W 387 nt4.26□□□□□ -1.73
UBP3Q01477 RPS13YDR064W 456 nt4.26□□□□□ -1.73
UBP3Q01477 ARV1YLR242C 966 nt4.26□□□□□ -1.73 RIP-Chip
UBP3Q01477 snR35snR35 204 nt4.26□□□□□ -1.73
UBP3Q01477 CHS3YBR023C 3498 nt4.26□□□□□ -1.73
UBP3Q01477 ERG5YMR015C 1617 nt4.25□□□□□ -1.73
UBP3Q01477 SPT16YGL207W 3108 nt4.25□□□□□ -1.73
UBP3Q01477 snR65snR65 100 nt4.25□□□□□ -1.73
UBP3Q01477 PHM6YDR281C 315 nt4.25□□□□□ -1.73
UBP3Q01477 CPA2YJR109C 3357 nt4.25□□□□□ -1.73
UBP3Q01477 SPE1YKL184W 1401 nt4.25□□□□□ -1.73
UBP3Q01477 YKE2YLR200W 345 nt4.25□□□□□ -1.73
UBP3Q01477 RPC40YPR110C 1008 nt4.25□□□□□ -1.73
UBP3Q01477 NOC2YOR206W 2133 nt4.25□□□□□ -1.73
UBP3Q01477 HBT1YDL223C 3141 nt4.25□□□□□ -1.73 RIP-Chip
UBP3Q01477 YPS6YIR039C 1614 nt4.24□□□□□ -1.73
UBP3Q01477 CCM1YGR150C 2595 nt4.24□□□□□ -1.73
UBP3Q01477 YCF1YDR135C 4548 nt4.24□□□□□ -1.73 RIP-Chip
UBP3Q01477 SRD1YCR018C 666 nt4.24□□□□□ -1.73
UBP3Q01477 MRPL11YDL202W 750 nt4.24□□□□□ -1.73
UBP3Q01477 YDR262WYDR262W 819 nt4.24□□□□□ -1.73
UBP3Q01477 YDR537CYDR537C 606 nt4.24□□□□□ -1.73
UBP3Q01477 RPB3YIL021W 957 nt4.24□□□□□ -1.73
UBP3Q01477 YKL068W-AYKL068W-A 237 nt4.24□□□□□ -1.73
UBP3Q01477 YML009C-AYML009C-A 327 nt4.24□□□□□ -1.73
UBP3Q01477 YNL184CYNL184C 327 nt4.24□□□□□ -1.73
UBP3Q01477 SYT1YPR095C 3681 nt4.24□□□□□ -1.73 RIP-Chip
UBP3Q01477 ACE2YLR131C 2313 nt4.23□□□□□ -1.73
UBP3Q01477 NCR1YPL006W 3513 nt4.23□□□□□ -1.73
UBP3Q01477 YGR237CYGR237C 2358 nt4.23□□□□□ -1.73
UBP3Q01477 YDL152WYDL152W 366 nt4.23□□□□□ -1.73
UBP3Q01477 MRH1YDR033W 963 nt4.23□□□□□ -1.73
UBP3Q01477 YKL156C-AYKL156C-A 117 nt4.23□□□□□ -1.73
UBP3Q01477 MRPL38YKL170W 417 nt4.23□□□□□ -1.73
UBP3Q01477 COX8YLR395C 237 nt4.23□□□□□ -1.73
UBP3Q01477 YLR434CYLR434C 384 nt4.23□□□□□ -1.73
UBP3Q01477 YMR013C-AYMR013C-A 150 nt4.23□□□□□ -1.73
UBP3Q01477 YBR209WYBR209W 318 nt4.23□□□□□ -1.73
UBP3Q01477 TMA108YIL137C 2841 nt4.22□□□□□ -1.73
UBP3Q01477 PDS5YMR076C 3834 nt4.22□□□□□ -1.73
UBP3Q01477 SMX2YFL017W-A 234 nt4.22□□□□□ -1.73
UBP3Q01477 YGR073CYGR073C 372 nt4.22□□□□□ -1.73
UBP3Q01477 YHR032C-AYHR032C-A 120 nt4.22□□□□□ -1.73
UBP3Q01477 PCL5YHR071W 690 nt4.22□□□□□ -1.73
UBP3Q01477 HIS5YIL116W 1158 nt4.22□□□□□ -1.73 RIP-Chip
UBP3Q01477 YAL063C-AYAL063C-A 291 nt4.22□□□□□ -1.73
UBP3Q01477 YNL337WYNL337W 255 nt4.22□□□□□ -1.73
UBP3Q01477 AFT2YPL202C 1251 nt4.22□□□□□ -1.73
UBP3Q01477 YNR063WYNR063W 1824 nt4.22□□□□□ -1.73
UBP3Q01477 TIF4631YGR162W 2859 nt4.22□□□□□ -1.73
UBP3Q01477 VAC14YLR386W 2643 nt4.21□□□□□ -1.74
UBP3Q01477 IRC2YDR112W 309 nt4.21□□□□□ -1.74
UBP3Q01477 AHA1YDR214W 1053 nt4.21□□□□□ -1.74
UBP3Q01477 YJL086CYJL086C 369 nt4.21□□□□□ -1.74
UBP3Q01477 YKL183C-AYKL183C-A 213 nt4.21□□□□□ -1.74
UBP3Q01477 YMR304C-AYMR304C-A 351 nt4.21□□□□□ -1.74
UBP3Q01477 PEX11YOL147C 711 nt4.21□□□□□ -1.74
UBP3Q01477 YBR032WYBR032W 303 nt4.21□□□□□ -1.74
UBP3Q01477 PEX5YDR244W 1839 nt4.21□□□□□ -1.74
UBP3Q01477 BRE5YNR051C 1548 nt4.21□□□□□ -1.74 RIP-Chip
UBP3Q01477 VMA1YDL185W 3216 nt4.2□□□□□ -1.74
UBP3Q01477 GCN4YEL009C 846 nt4.2□□□□□ -1.74
UBP3Q01477 IGO2YHR132W-A 396 nt4.2□□□□□ -1.74 RIP-Chip
UBP3Q01477 IRC16YPR038W 360 nt4.2□□□□□ -1.74
UBP3Q01477 YPR053CYPR053C 456 nt4.2□□□□□ -1.74
UBP3Q01477 ARR2YPR200C 393 nt4.2□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 62.8 ms