Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 YNL193WYNL193W 1677 nt2.95□□□□□ -1.94
RPA49Q01080 ASI3YNL008C 2031 nt2.95□□□□□ -1.94
RPA49Q01080 RPN1YHR027C 2982 nt2.95□□□□□ -1.94
RPA49Q01080 FAR1YJL157C 2493 nt2.95□□□□□ -1.94
RPA49Q01080 BIT61YJL058C 1632 nt2.95□□□□□ -1.94
RPA49Q01080 YER165C-AYER165C-A 357 nt2.95□□□□□ -1.94
RPA49Q01080 SAE2YGL175C 1038 nt2.95□□□□□ -1.94
RPA49Q01080 CAP1YKL007W 807 nt2.95□□□□□ -1.94
RPA49Q01080 DAD2YKR083C 402 nt2.95□□□□□ -1.94
RPA49Q01080 MST28YAR033W 705 nt2.95□□□□□ -1.94
RPA49Q01080 PRE8YML092C 753 nt2.95□□□□□ -1.94
RPA49Q01080 YCL002CYCL002C 792 nt2.95□□□□□ -1.94
RPA49Q01080 APM3YBR288C 1452 nt2.95□□□□□ -1.94
RPA49Q01080 PSK1YAL017W 4071 nt2.94□□□□□ -1.94
RPA49Q01080 TFC4YGR047C 3078 nt2.94□□□□□ -1.94
RPA49Q01080 YDR338CYDR338C 2088 nt2.94□□□□□ -1.94
RPA49Q01080 VHR2YER064C 1518 nt2.94□□□□□ -1.94
RPA49Q01080 SLH1YGR271W 5904 nt2.94□□□□□ -1.94
RPA49Q01080 RPL11BYGR085C 525 nt2.94□□□□□ -1.94
RPA49Q01080 EST3YIL009C-A 546 nt2.94□□□□□ -1.94
RPA49Q01080 MCR1YKL150W 909 nt2.94□□□□□ -1.94
RPA49Q01080 YPT52YKR014C 705 nt2.94□□□□□ -1.94
RPA49Q01080 CDC123YLR215C 1083 nt2.94□□□□□ -1.94
RPA49Q01080 LIP2YLR239C 987 nt2.94□□□□□ -1.94
RPA49Q01080 YNL043CYNL043C 321 nt2.94□□□□□ -1.94
RPA49Q01080 YNL050CYNL050C 813 nt2.94□□□□□ -1.94
RPA49Q01080 CSI2YOL007C 1026 nt2.94□□□□□ -1.94
RPA49Q01080 NGL1YOL042W 1092 nt2.94□□□□□ -1.94
RPA49Q01080 RPL11AYPR102C 525 nt2.94□□□□□ -1.94
RPA49Q01080 NTC20YBR188C 423 nt2.94□□□□□ -1.94
RPA49Q01080 YFL002W-BYFL002W-B 1317 nt2.93□□□□□ -1.94
RPA49Q01080 YGR161W-AYGR161W-A 1317 nt2.93□□□□□ -1.94
RPA49Q01080 YBL100W-AYBL100W-A 1317 nt2.93□□□□□ -1.94
RPA49Q01080 YCL020WYCL020W 1317 nt2.93□□□□□ -1.94
RPA49Q01080 TFB1YDR311W 1929 nt2.93□□□□□ -1.94
RPA49Q01080 YMR181CYMR181C 465 nt2.93□□□□□ -1.94
RPA49Q01080 ARL3YPL051W 597 nt2.93□□□□□ -1.94
RPA49Q01080 CUR1YPR158W 759 nt2.93□□□□□ -1.94
RPA49Q01080 NET1YJL076W 3570 nt2.92□□□□□ -1.94
RPA49Q01080 BOI1YBL085W 2943 nt2.92□□□□□ -1.94
RPA49Q01080 VPS64YDR200C 1815 nt2.92□□□□□ -1.94
RPA49Q01080 MIC19YFR011C 513 nt2.92□□□□□ -1.94
RPA49Q01080 YGR226CYGR226C 210 nt2.92□□□□□ -1.94
RPA49Q01080 PCL5YHR071W 690 nt2.92□□□□□ -1.94
RPA49Q01080 GPI14YJR013W 1212 nt2.92□□□□□ -1.94
RPA49Q01080 SDS22YKL193C 1017 nt2.92□□□□□ -1.94
RPA49Q01080 AIM36YMR157C 768 nt2.92□□□□□ -1.94
RPA49Q01080 AFT2YPL202C 1251 nt2.92□□□□□ -1.94
RPA49Q01080 SEC66YBR171W 621 nt2.92□□□□□ -1.94
RPA49Q01080 YGR067CYGR067C 2415 nt2.92□□□□□ -1.94
RPA49Q01080 DOA4YDR069C 2781 nt2.92□□□□□ -1.94
RPA49Q01080 SLP1YOR154W 1764 nt2.92□□□□□ -1.94
RPA49Q01080 YHR078WYHR078W 1659 nt2.92□□□□□ -1.94
RPA49Q01080 YKL075CYKL075C 1353 nt2.91□□□□□ -1.94
RPA49Q01080 RMT2YDR465C 1239 nt2.91□□□□□ -1.94
RPA49Q01080 NTF2YER009W 378 nt2.91□□□□□ -1.94
RPA49Q01080 YGR121W-AYGR121W-A 216 nt2.91□□□□□ -1.94
RPA49Q01080 RSR1YGR152C 819 nt2.91□□□□□ -1.94
RPA49Q01080 SFT1YKL006C-A 294 nt2.91□□□□□ -1.94
RPA49Q01080 MSN1YOL116W 1149 nt2.91□□□□□ -1.94
RPA49Q01080 ADF1YCL058W-A 342 nt2.91□□□□□ -1.94
RPA49Q01080 SLF1YDR515W 1344 nt2.91□□□□□ -1.94
RPA49Q01080 SPO71YDR104C 3738 nt2.91□□□□□ -1.94
RPA49Q01080 STI1YOR027W 1770 nt2.9□□□□□ -1.94
RPA49Q01080 VPS63YLR261C 327 nt2.9□□□□□ -1.95
RPA49Q01080 JIP3YLR331C 378 nt2.9□□□□□ -1.95
RPA49Q01080 RRT16YNL105W 429 nt2.9□□□□□ -1.95
RPA49Q01080 RPL23AYBL087C 414 nt2.9□□□□□ -1.95
RPA49Q01080 YBR063CYBR063C 1215 nt2.9□□□□□ -1.95
RPA49Q01080 YJL132WYJL132W 2253 nt2.9□□□□□ -1.95
RPA49Q01080 SEC7YDR170C 6030 nt2.9□□□□□ -1.95
RPA49Q01080 YPL150WYPL150W 2706 nt2.9□□□□□ -1.95
RPA49Q01080 BCK1YJL095W 4437 nt2.9□□□□□ -1.95
RPA49Q01080 DNA2YHR164C 4569 nt2.9□□□□□ -1.95
RPA49Q01080 DBF20YPR111W 1695 nt2.89□□□□□ -1.95
RPA49Q01080 YGR018CYGR018C 330 nt2.89□□□□□ -1.95
RPA49Q01080 ECI1YLR284C 843 nt2.89□□□□□ -1.95
RPA49Q01080 YRO2YBR054W 1035 nt2.89□□□□□ -1.95
RPA49Q01080 YCL007CYCL007C 393 nt2.89□□□□□ -1.95
RPA49Q01080 DSE4YNR067C 3354 nt2.89□□□□□ -1.95
RPA49Q01080 RCY1YJL204C 2523 nt2.88□□□□□ -1.95
RPA49Q01080 RAX2YLR084C 3663 nt2.88□□□□□ -1.95
RPA49Q01080 YLR278CYLR278C 4026 nt2.88□□□□□ -1.95
RPA49Q01080 TAF2YCR042C 4224 nt2.88□□□□□ -1.95
RPA49Q01080 MAL33YBR297W 1407 nt2.88□□□□□ -1.95
RPA49Q01080 APC11YDL008W 498 nt2.88□□□□□ -1.95
RPA49Q01080 SNA4YDL123W 423 nt2.88□□□□□ -1.95
RPA49Q01080 YDR442WYDR442W 393 nt2.88□□□□□ -1.95
RPA49Q01080 YIP1YGR172C 747 nt2.88□□□□□ -1.95
RPA49Q01080 YHR050W-AYHR050W-A 171 nt2.88□□□□□ -1.95
RPA49Q01080 AIM19YIL087C 474 nt2.88□□□□□ -1.95
RPA49Q01080 RPS16AYMR143W 432 nt2.88□□□□□ -1.95
RPA49Q01080 YBR062CYBR062C 543 nt2.88□□□□□ -1.95
RPA49Q01080 ECM29YHL030W 5607 nt2.87□□□□□ -1.95
RPA49Q01080 MOT1YPL082C 5604 nt2.87□□□□□ -1.95
RPA49Q01080 PBP4YDL053C 558 nt2.87□□□□□ -1.95
RPA49Q01080 VMA8YEL051W 771 nt2.87□□□□□ -1.95
RPA49Q01080 TCD1YHR003C 1290 nt2.87□□□□□ -1.95
RPA49Q01080 YBL065WYBL065W 345 nt2.87□□□□□ -1.95
RPA49Q01080 PBS2YJL128C 2007 nt2.86□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 83.2 ms