Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
HLA-DRB3P79483 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-DRB3P79483 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRB3P79483 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
HLA-DRB3P79483 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 AC106739.1-201ENST00000617035 715 ntBASIC17.36■□□□□ 0.37
HLA-DRB3P79483 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRB3P79483 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 EDA-201ENST00000338901 1233 ntBASIC17.35■□□□□ 0.37
HLA-DRB3P79483 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 MIR572-201ENST00000384983 95 ntBASIC17.35■□□□□ 0.37
HLA-DRB3P79483 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 GABARAPL3-202ENST00000624044 1851 ntBASIC17.35■□□□□ 0.37
HLA-DRB3P79483 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRB3P79483 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HLA-DRB3P79483 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DRB3P79483 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.33■□□□□ 0.37
HLA-DRB3P79483 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DRB3P79483 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.33■□□□□ 0.37
HLA-DRB3P79483 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DRB3P79483 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
HLA-DRB3P79483 AP005212.1-201ENST00000581547 1997 ntBASIC17.33■□□□□ 0.37
HLA-DRB3P79483 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HLA-DRB3P79483 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
HLA-DRB3P79483 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DRB3P79483 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.33■□□□□ 0.37
HLA-DRB3P79483 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.33■□□□□ 0.37
HLA-DRB3P79483 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRB3P79483 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HLA-DRB3P79483 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DRB3P79483 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRB3P79483 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DRB3P79483 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DRB3P79483 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DRB3P79483 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HLA-DRB3P79483 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRB3P79483 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRB3P79483 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRB3P79483 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms