Protein–RNA interactions for Protein: P78414

IRX1, Iroquois-class homeodomain protein IRX-1, humanhuman

Predicted RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX1P78414 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.35■□□□□ 0.85
IRX1P78414 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
IRX1P78414 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IRX1P78414 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX1P78414 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IRX1P78414 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX1P78414 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.35■□□□□ 0.85
IRX1P78414 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX1P78414 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IRX1P78414 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
IRX1P78414 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX1P78414 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX1P78414 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX1P78414 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX1P78414 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
IRX1P78414 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
IRX1P78414 FEM1AP1-201ENST00000431297 1995 ntBASIC20.34■□□□□ 0.85
IRX1P78414 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX1P78414 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX1P78414 AL356441.2-201ENST00000443009 864 ntBASIC20.34■□□□□ 0.85
IRX1P78414 AC099791.2-201ENST00000605725 427 ntBASIC20.34■□□□□ 0.85
IRX1P78414 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.34■□□□□ 0.85
IRX1P78414 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
IRX1P78414 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
IRX1P78414 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX1P78414 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX1P78414 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.34■□□□□ 0.85
IRX1P78414 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX1P78414 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
IRX1P78414 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.34■□□□□ 0.85
IRX1P78414 AC003102.1-202ENST00000563394 1796 ntBASIC20.34■□□□□ 0.85
IRX1P78414 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.34■□□□□ 0.85
IRX1P78414 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.34■□□□□ 0.85
IRX1P78414 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IRX1P78414 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.33■□□□□ 0.85
IRX1P78414 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
IRX1P78414 AC018445.3-201ENST00000624177 1945 ntBASIC20.33■□□□□ 0.85
IRX1P78414 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
IRX1P78414 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
IRX1P78414 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
IRX1P78414 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IRX1P78414 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IRX1P78414 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
IRX1P78414 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IRX1P78414 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IRX1P78414 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.33■□□□□ 0.85
IRX1P78414 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.33■□□□□ 0.85
IRX1P78414 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
IRX1P78414 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.33■□□□□ 0.84
IRX1P78414 BX323043.1-201ENST00000641006 1765 ntBASIC20.33■□□□□ 0.84
IRX1P78414 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
IRX1P78414 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.33■□□□□ 0.84
IRX1P78414 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.33■□□□□ 0.84
IRX1P78414 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX1P78414 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
IRX1P78414 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.32■□□□□ 0.84
IRX1P78414 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
IRX1P78414 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IRX1P78414 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
IRX1P78414 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX1P78414 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX1P78414 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.32■□□□□ 0.84
IRX1P78414 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
IRX1P78414 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX1P78414 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
IRX1P78414 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX1P78414 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.32■□□□□ 0.84
IRX1P78414 AP004607.7-201ENST00000527152 1677 ntBASIC20.32■□□□□ 0.84
IRX1P78414 LINC01006-201ENST00000333319 2292 ntBASIC20.32■□□□□ 0.84
IRX1P78414 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IRX1P78414 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.32■□□□□ 0.84
IRX1P78414 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IRX1P78414 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
IRX1P78414 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IRX1P78414 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.31■□□□□ 0.84
IRX1P78414 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IRX1P78414 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IRX1P78414 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.31■□□□□ 0.84
IRX1P78414 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IRX1P78414 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.31■□□□□ 0.84
IRX1P78414 AP005435.1-201ENST00000529293 1178 ntBASIC20.31■□□□□ 0.84
IRX1P78414 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.31■□□□□ 0.84
IRX1P78414 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IRX1P78414 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IRX1P78414 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IRX1P78414 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
IRX1P78414 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IRX1P78414 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IRX1P78414 GABARAPL3-202ENST00000624044 1851 ntBASIC20.3■□□□□ 0.84
IRX1P78414 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX1P78414 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX1P78414 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX1P78414 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX1P78414 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX1P78414 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX1P78414 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX1P78414 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
IRX1P78414 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX1P78414 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.3■□□□□ 0.84
IRX1P78414 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms