Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAE1P78406 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.75■□□□□ 0.75
RAE1P78406 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAE1P78406 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAE1P78406 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAE1P78406 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.75■□□□□ 0.75
RAE1P78406 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAE1P78406 DUX4L2-201ENST00000561772 1275 ntBASIC19.75■□□□□ 0.75
RAE1P78406 KRT18P61-201ENST00000585825 1298 ntBASIC19.75■□□□□ 0.75
RAE1P78406 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.75■□□□□ 0.75
RAE1P78406 AP001160.3-201ENST00000601484 763 ntBASIC19.75■□□□□ 0.75
RAE1P78406 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.75■□□□□ 0.75
RAE1P78406 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
RAE1P78406 DUX4L6-201ENST00000626483 1275 ntBASIC19.75■□□□□ 0.75
RAE1P78406 DUX4L1-201ENST00000627662 1275 ntBASIC19.75■□□□□ 0.75
RAE1P78406 DUX4L8-201ENST00000629013 1275 ntBASIC19.75■□□□□ 0.75
RAE1P78406 DUX4L3-201ENST00000630187 1275 ntBASIC19.75■□□□□ 0.75
RAE1P78406 DUX4L7-201ENST00000630678 1275 ntBASIC19.75■□□□□ 0.75
RAE1P78406 DUX4L5-201ENST00000630834 1275 ntBASIC19.75■□□□□ 0.75
RAE1P78406 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.75■□□□□ 0.75
RAE1P78406 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.75■□□□□ 0.75
RAE1P78406 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.75■□□□□ 0.75
RAE1P78406 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RAE1P78406 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RAE1P78406 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAE1P78406 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAE1P78406 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RAE1P78406 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAE1P78406 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAE1P78406 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAE1P78406 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.74■□□□□ 0.75
RAE1P78406 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAE1P78406 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAE1P78406 AC011484.1-201ENST00000377652 1995 ntBASIC19.74■□□□□ 0.75
RAE1P78406 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAE1P78406 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.74■□□□□ 0.75
RAE1P78406 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RAE1P78406 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.74■□□□□ 0.75
RAE1P78406 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.74■□□□□ 0.75
RAE1P78406 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAE1P78406 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.74■□□□□ 0.75
RAE1P78406 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.74■□□□□ 0.75
RAE1P78406 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAE1P78406 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAE1P78406 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.74■□□□□ 0.75
RAE1P78406 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.74■□□□□ 0.75
RAE1P78406 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RAE1P78406 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAE1P78406 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAE1P78406 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAE1P78406 AC073314.1-201ENST00000568729 2216 ntBASIC19.74■□□□□ 0.75
RAE1P78406 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAE1P78406 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAE1P78406 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RAE1P78406 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.73■□□□□ 0.75
RAE1P78406 AC092667.1-201ENST00000434301 2586 ntBASIC19.73■□□□□ 0.75
RAE1P78406 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RAE1P78406 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAE1P78406 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAE1P78406 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAE1P78406 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAE1P78406 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
RAE1P78406 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RAE1P78406 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.73■□□□□ 0.75
RAE1P78406 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.73■□□□□ 0.75
RAE1P78406 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.73■□□□□ 0.75
RAE1P78406 AC007225.1-201ENST00000566331 1836 ntBASIC19.73■□□□□ 0.75
RAE1P78406 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAE1P78406 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RAE1P78406 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.73■□□□□ 0.75
RAE1P78406 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RAE1P78406 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAE1P78406 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RAE1P78406 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.72■□□□□ 0.75
RAE1P78406 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAE1P78406 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAE1P78406 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.72■□□□□ 0.75
RAE1P78406 AP005212.1-201ENST00000581547 1997 ntBASIC19.72■□□□□ 0.75
RAE1P78406 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAE1P78406 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAE1P78406 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.72■□□□□ 0.75
RAE1P78406 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.72■□□□□ 0.75
RAE1P78406 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAE1P78406 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.72■□□□□ 0.75
RAE1P78406 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
RAE1P78406 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RAE1P78406 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
RAE1P78406 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.72■□□□□ 0.75
RAE1P78406 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.72■□□□□ 0.75
RAE1P78406 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAE1P78406 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAE1P78406 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAE1P78406 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAE1P78406 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RAE1P78406 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAE1P78406 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAE1P78406 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RAE1P78406 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAE1P78406 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAE1P78406 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms