Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RPL39P62891 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RPL39P62891 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPL39P62891 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPL39P62891 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPL39P62891 AC121338.2-201ENST00000622535 1744 ntBASIC14.67□□□□□ -0.06
RPL39P62891 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RPL39P62891 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
RPL39P62891 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPL39P62891 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.67□□□□□ -0.06
RPL39P62891 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPL39P62891 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RPL39P62891 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPL39P62891 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPL39P62891 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RPL39P62891 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RPL39P62891 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.67□□□□□ -0.06
RPL39P62891 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RPL39P62891 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RPL39P62891 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RPL39P62891 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL39P62891 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RPL39P62891 AC007225.1-201ENST00000566331 1836 ntBASIC14.66□□□□□ -0.06
RPL39P62891 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.66□□□□□ -0.06
RPL39P62891 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL39P62891 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.66□□□□□ -0.06
RPL39P62891 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL39P62891 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RPL39P62891 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL39P62891 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL39P62891 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RPL39P62891 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.66□□□□□ -0.06
RPL39P62891 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL39P62891 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RPL39P62891 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.66□□□□□ -0.06
RPL39P62891 AC099791.2-201ENST00000605725 427 ntBASIC14.66□□□□□ -0.06
RPL39P62891 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL39P62891 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL39P62891 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL39P62891 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.66□□□□□ -0.06
RPL39P62891 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
RPL39P62891 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.66□□□□□ -0.06
RPL39P62891 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.66□□□□□ -0.06
RPL39P62891 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.66□□□□□ -0.06
RPL39P62891 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RPL39P62891 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
RPL39P62891 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
RPL39P62891 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RPL39P62891 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL39P62891 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL39P62891 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.65□□□□□ -0.06
RPL39P62891 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.65□□□□□ -0.06
RPL39P62891 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
RPL39P62891 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL39P62891 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL39P62891 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.65□□□□□ -0.06
RPL39P62891 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL39P62891 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL39P62891 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPL39P62891 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.65□□□□□ -0.06
RPL39P62891 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL39P62891 MIR3181-201ENST00000578512 73 ntBASIC14.65□□□□□ -0.06
RPL39P62891 AC010525.1-201ENST00000585559 441 ntBASIC14.65□□□□□ -0.06
RPL39P62891 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RPL39P62891 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPL39P62891 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.65□□□□□ -0.06
RPL39P62891 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RPL39P62891 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL39P62891 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL39P62891 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL39P62891 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.65□□□□□ -0.06
RPL39P62891 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL39P62891 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.65□□□□□ -0.06
RPL39P62891 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL39P62891 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
RPL39P62891 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.65□□□□□ -0.07
RPL39P62891 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.64□□□□□ -0.07
RPL39P62891 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RPL39P62891 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL39P62891 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RPL39P62891 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RPL39P62891 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.64□□□□□ -0.07
RPL39P62891 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL39P62891 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RPL39P62891 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL39P62891 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPL39P62891 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL39P62891 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPL39P62891 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL39P62891 AC239859.2-201ENST00000444165 318 ntBASIC14.64□□□□□ -0.07
RPL39P62891 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.64□□□□□ -0.07
RPL39P62891 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL39P62891 AP006587.3-201ENST00000525742 1516 ntBASIC14.64□□□□□ -0.07
RPL39P62891 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL39P62891 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.64□□□□□ -0.07
RPL39P62891 AL512408.1-201ENST00000569378 2000 ntBASIC14.64□□□□□ -0.07
RPL39P62891 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPL39P62891 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.64□□□□□ -0.07
RPL39P62891 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL39P62891 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms