Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPS3AP61247 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS3AP61247 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RPS3AP61247 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS3AP61247 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.37■□□□□ 0.69
RPS3AP61247 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS3AP61247 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPS3AP61247 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS3AP61247 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPS3AP61247 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RPS3AP61247 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPS3AP61247 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.36■□□□□ 0.69
RPS3AP61247 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS3AP61247 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS3AP61247 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS3AP61247 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.36■□□□□ 0.69
RPS3AP61247 KRT18P14-201ENST00000534205 1250 ntBASIC19.36■□□□□ 0.69
RPS3AP61247 CCDC92B-201ENST00000575506 885 ntBASIC19.36■□□□□ 0.69
RPS3AP61247 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.36■□□□□ 0.69
RPS3AP61247 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPS3AP61247 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.36■□□□□ 0.69
RPS3AP61247 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS3AP61247 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RPS3AP61247 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS3AP61247 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPS3AP61247 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.36■□□□□ 0.69
RPS3AP61247 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.36■□□□□ 0.69
RPS3AP61247 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS3AP61247 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RPS3AP61247 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS3AP61247 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RPS3AP61247 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.35■□□□□ 0.69
RPS3AP61247 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
RPS3AP61247 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.35■□□□□ 0.69
RPS3AP61247 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.35■□□□□ 0.69
RPS3AP61247 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.35■□□□□ 0.69
RPS3AP61247 TERF1P2-201ENST00000583350 1212 ntBASIC19.35■□□□□ 0.69
RPS3AP61247 TPRG1LP1-201ENST00000598702 760 ntBASIC19.35■□□□□ 0.69
RPS3AP61247 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RPS3AP61247 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.35■□□□□ 0.69
RPS3AP61247 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.35■□□□□ 0.69
RPS3AP61247 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.35■□□□□ 0.69
RPS3AP61247 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.35■□□□□ 0.69
RPS3AP61247 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.35■□□□□ 0.69
RPS3AP61247 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RPS3AP61247 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS3AP61247 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS3AP61247 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.34■□□□□ 0.69
RPS3AP61247 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS3AP61247 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS3AP61247 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS3AP61247 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
RPS3AP61247 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPS3AP61247 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RPS3AP61247 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS3AP61247 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPS3AP61247 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.34■□□□□ 0.69
RPS3AP61247 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.34■□□□□ 0.69
RPS3AP61247 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.34■□□□□ 0.69
RPS3AP61247 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.34■□□□□ 0.69
RPS3AP61247 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.34■□□□□ 0.69
RPS3AP61247 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.34■□□□□ 0.69
RPS3AP61247 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RPS3AP61247 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.34■□□□□ 0.69
RPS3AP61247 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.34■□□□□ 0.69
RPS3AP61247 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RPS3AP61247 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RPS3AP61247 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RPS3AP61247 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.33■□□□□ 0.69
RPS3AP61247 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RPS3AP61247 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RPS3AP61247 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.33■□□□□ 0.68
RPS3AP61247 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.33■□□□□ 0.68
RPS3AP61247 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPS3AP61247 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.33■□□□□ 0.68
RPS3AP61247 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPS3AP61247 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPS3AP61247 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RPS3AP61247 AP004607.7-201ENST00000527152 1677 ntBASIC19.33■□□□□ 0.68
RPS3AP61247 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RPS3AP61247 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms