Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUMO3P55854 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUMO3P55854 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUMO3P55854 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUMO3P55854 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.86■□□□□ 0.61
SUMO3P55854 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUMO3P55854 AC007322.4-201ENST00000509611 723 ntBASIC18.86■□□□□ 0.61
SUMO3P55854 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
SUMO3P55854 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
SUMO3P55854 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SUMO3P55854 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SUMO3P55854 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUMO3P55854 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUMO3P55854 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUMO3P55854 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUMO3P55854 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUMO3P55854 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SUMO3P55854 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.86■□□□□ 0.61
SUMO3P55854 AF106564.1-201ENST00000607058 2553 ntBASIC18.86■□□□□ 0.61
SUMO3P55854 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUMO3P55854 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.85■□□□□ 0.61
SUMO3P55854 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.85■□□□□ 0.61
SUMO3P55854 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SUMO3P55854 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SUMO3P55854 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUMO3P55854 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.85■□□□□ 0.61
SUMO3P55854 AC091799.1-201ENST00000422823 811 ntBASIC18.85■□□□□ 0.61
SUMO3P55854 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SUMO3P55854 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.85■□□□□ 0.61
SUMO3P55854 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.85■□□□□ 0.61
SUMO3P55854 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.85■□□□□ 0.61
SUMO3P55854 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUMO3P55854 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SUMO3P55854 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SUMO3P55854 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SUMO3P55854 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
SUMO3P55854 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SUMO3P55854 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SUMO3P55854 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SUMO3P55854 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SUMO3P55854 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUMO3P55854 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUMO3P55854 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SUMO3P55854 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SUMO3P55854 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.84■□□□□ 0.61
SUMO3P55854 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUMO3P55854 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SUMO3P55854 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.84■□□□□ 0.61
SUMO3P55854 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.84■□□□□ 0.61
SUMO3P55854 AL162412.1-201ENST00000567129 965 ntBASIC18.84■□□□□ 0.61
SUMO3P55854 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SUMO3P55854 AC011767.1-201ENST00000617410 1153 ntBASIC18.84■□□□□ 0.61
SUMO3P55854 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUMO3P55854 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUMO3P55854 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.84■□□□□ 0.61
SUMO3P55854 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.84■□□□□ 0.61
SUMO3P55854 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUMO3P55854 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SUMO3P55854 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
SUMO3P55854 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.83■□□□□ 0.61
SUMO3P55854 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.83■□□□□ 0.61
SUMO3P55854 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SUMO3P55854 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SUMO3P55854 AC011484.1-201ENST00000377652 1995 ntBASIC18.83■□□□□ 0.61
SUMO3P55854 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SUMO3P55854 CDV3P1-201ENST00000471403 739 ntBASIC18.83■□□□□ 0.6
SUMO3P55854 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SUMO3P55854 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SUMO3P55854 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SUMO3P55854 AL137784.2-201ENST00000607332 1000 ntBASIC18.83■□□□□ 0.6
SUMO3P55854 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.83■□□□□ 0.6
SUMO3P55854 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.83■□□□□ 0.6
SUMO3P55854 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.83■□□□□ 0.6
SUMO3P55854 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SUMO3P55854 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SUMO3P55854 AC005229.4-201ENST00000610085 2198 ntBASIC18.83■□□□□ 0.6
SUMO3P55854 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SUMO3P55854 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SUMO3P55854 AC116050.2-201ENST00000612102 1779 ntBASIC18.83■□□□□ 0.6
SUMO3P55854 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SUMO3P55854 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SUMO3P55854 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SUMO3P55854 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SUMO3P55854 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.83■□□□□ 0.6
SUMO3P55854 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.83■□□□□ 0.6
SUMO3P55854 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.82■□□□□ 0.6
SUMO3P55854 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUMO3P55854 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.82■□□□□ 0.6
SUMO3P55854 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.82■□□□□ 0.6
SUMO3P55854 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.82■□□□□ 0.6
SUMO3P55854 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SUMO3P55854 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUMO3P55854 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUMO3P55854 AC121338.2-201ENST00000622535 1744 ntBASIC18.82■□□□□ 0.6
SUMO3P55854 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SUMO3P55854 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
SUMO3P55854 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.82■□□□□ 0.6
SUMO3P55854 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.82■□□□□ 0.6
SUMO3P55854 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SUMO3P55854 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms