Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRRX1P54821 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.1■□□□□ 0.33
PRRX1P54821 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRRX1P54821 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRRX1P54821 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRRX1P54821 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRRX1P54821 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PRRX1P54821 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.09■□□□□ 0.33
PRRX1P54821 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRRX1P54821 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PRRX1P54821 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.09■□□□□ 0.33
PRRX1P54821 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
PRRX1P54821 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRRX1P54821 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRRX1P54821 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRRX1P54821 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRRX1P54821 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
PRRX1P54821 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRRX1P54821 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRRX1P54821 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRRX1P54821 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.09■□□□□ 0.33
PRRX1P54821 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
PRRX1P54821 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRRX1P54821 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRRX1P54821 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRRX1P54821 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
PRRX1P54821 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRRX1P54821 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRRX1P54821 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.08■□□□□ 0.33
PRRX1P54821 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRRX1P54821 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRRX1P54821 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRRX1P54821 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.08■□□□□ 0.32
PRRX1P54821 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRRX1P54821 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PRRX1P54821 AL137060.1-201ENST00000618151 2648 ntBASIC17.08■□□□□ 0.32
PRRX1P54821 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRRX1P54821 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PRRX1P54821 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PRRX1P54821 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.07■□□□□ 0.32
PRRX1P54821 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PRRX1P54821 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.07■□□□□ 0.32
PRRX1P54821 AC061975.6-201ENST00000579045 1553 ntBASIC17.07■□□□□ 0.32
PRRX1P54821 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRRX1P54821 KRT16P2-201ENST00000414673 1423 ntBASIC17.07■□□□□ 0.32
PRRX1P54821 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRRX1P54821 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PRRX1P54821 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.07■□□□□ 0.32
PRRX1P54821 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRRX1P54821 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.07■□□□□ 0.32
PRRX1P54821 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRRX1P54821 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRRX1P54821 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.07■□□□□ 0.32
PRRX1P54821 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRRX1P54821 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRRX1P54821 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRRX1P54821 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.06■□□□□ 0.32
PRRX1P54821 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRRX1P54821 AIRN-201ENST00000601203 4374 ntBASIC17.06■□□□□ 0.32
PRRX1P54821 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PRRX1P54821 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRRX1P54821 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRRX1P54821 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRRX1P54821 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRRX1P54821 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.06■□□□□ 0.32
PRRX1P54821 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRRX1P54821 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRRX1P54821 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRRX1P54821 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRRX1P54821 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.06■□□□□ 0.32
PRRX1P54821 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.06■□□□□ 0.32
PRRX1P54821 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRRX1P54821 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.06■□□□□ 0.32
PRRX1P54821 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRRX1P54821 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRRX1P54821 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.05■□□□□ 0.32
PRRX1P54821 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRRX1P54821 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRRX1P54821 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRRX1P54821 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRRX1P54821 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRRX1P54821 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.05■□□□□ 0.32
PRRX1P54821 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRRX1P54821 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRRX1P54821 KRT18P5-201ENST00000436075 1291 ntBASIC17.05■□□□□ 0.32
PRRX1P54821 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.05■□□□□ 0.32
PRRX1P54821 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRRX1P54821 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.05■□□□□ 0.32
PRRX1P54821 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.05■□□□□ 0.32
PRRX1P54821 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.05■□□□□ 0.32
PRRX1P54821 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRRX1P54821 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRRX1P54821 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRRX1P54821 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PRRX1P54821 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.05■□□□□ 0.32
PRRX1P54821 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRRX1P54821 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRRX1P54821 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRRX1P54821 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PRRX1P54821 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms