Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.05■□□□□ 0.8
EPHA4P54764 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA4P54764 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA4P54764 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA4P54764 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA4P54764 AC007322.3-201ENST00000426526 701 ntBASIC20.05■□□□□ 0.8
EPHA4P54764 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
EPHA4P54764 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.05■□□□□ 0.8
EPHA4P54764 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.05■□□□□ 0.8
EPHA4P54764 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.05■□□□□ 0.8
EPHA4P54764 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.05■□□□□ 0.8
EPHA4P54764 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.05■□□□□ 0.8
EPHA4P54764 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA4P54764 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.05■□□□□ 0.8
EPHA4P54764 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
EPHA4P54764 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA4P54764 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA4P54764 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.05■□□□□ 0.8
EPHA4P54764 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA4P54764 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHA4P54764 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA4P54764 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA4P54764 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
EPHA4P54764 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA4P54764 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.04■□□□□ 0.8
EPHA4P54764 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA4P54764 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
EPHA4P54764 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA4P54764 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.04■□□□□ 0.8
EPHA4P54764 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
EPHA4P54764 AC091874.3-201ENST00000512672 1195 ntBASIC20.04■□□□□ 0.8
EPHA4P54764 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA4P54764 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA4P54764 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.04■□□□□ 0.8
EPHA4P54764 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.04■□□□□ 0.8
EPHA4P54764 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA4P54764 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.04■□□□□ 0.8
EPHA4P54764 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA4P54764 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
EPHA4P54764 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA4P54764 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.03■□□□□ 0.8
EPHA4P54764 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.03■□□□□ 0.8
EPHA4P54764 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.03■□□□□ 0.8
EPHA4P54764 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
EPHA4P54764 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EPHA4P54764 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
EPHA4P54764 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EPHA4P54764 LSM12P1-201ENST00000411836 588 ntBASIC20.03■□□□□ 0.8
EPHA4P54764 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.03■□□□□ 0.8
EPHA4P54764 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
EPHA4P54764 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.03■□□□□ 0.8
EPHA4P54764 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
EPHA4P54764 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EPHA4P54764 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.03■□□□□ 0.8
EPHA4P54764 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EPHA4P54764 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EPHA4P54764 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.02■□□□□ 0.8
EPHA4P54764 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EPHA4P54764 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHA4P54764 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHA4P54764 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHA4P54764 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHA4P54764 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
EPHA4P54764 MCRIP2P1-201ENST00000394346 511 ntBASIC20.02■□□□□ 0.8
EPHA4P54764 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHA4P54764 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.02■□□□□ 0.8
EPHA4P54764 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EPHA4P54764 DUSP5P2-201ENST00000426873 1033 ntBASIC20.02■□□□□ 0.8
EPHA4P54764 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.02■□□□□ 0.8
EPHA4P54764 TSPY20P-201ENST00000450910 630 ntBASIC20.02■□□□□ 0.8
EPHA4P54764 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.02■□□□□ 0.8
EPHA4P54764 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.02■□□□□ 0.8
EPHA4P54764 CYP2T3P-201ENST00000601990 817 ntBASIC20.02■□□□□ 0.8
EPHA4P54764 AC083880.1-201ENST00000608266 535 ntBASIC20.02■□□□□ 0.8
EPHA4P54764 TMEM191A-211ENST00000637163 1067 ntBASIC20.02■□□□□ 0.8
EPHA4P54764 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHA4P54764 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EPHA4P54764 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EPHA4P54764 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.02■□□□□ 0.8
EPHA4P54764 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EPHA4P54764 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
EPHA4P54764 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA4P54764 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA4P54764 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA4P54764 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA4P54764 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA4P54764 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA4P54764 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.01■□□□□ 0.79
EPHA4P54764 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA4P54764 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA4P54764 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
EPHA4P54764 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
EPHA4P54764 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.01■□□□□ 0.79
EPHA4P54764 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.01■□□□□ 0.79
EPHA4P54764 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.01■□□□□ 0.79
EPHA4P54764 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.01■□□□□ 0.79
EPHA4P54764 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
EPHA4P54764 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA4P54764 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
EPHA4P54764 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms