Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLNS1AP54105 AC006455.2-201ENST00000429931 906 ntBASIC20.58■□□□□ 0.89
CLNS1AP54105 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.58■□□□□ 0.89
CLNS1AP54105 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
CLNS1AP54105 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLNS1AP54105 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.58■□□□□ 0.88
CLNS1AP54105 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLNS1AP54105 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CLNS1AP54105 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLNS1AP54105 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLNS1AP54105 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLNS1AP54105 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLNS1AP54105 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLNS1AP54105 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLNS1AP54105 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CLNS1AP54105 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLNS1AP54105 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.57■□□□□ 0.88
CLNS1AP54105 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.57■□□□□ 0.88
CLNS1AP54105 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.57■□□□□ 0.88
CLNS1AP54105 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLNS1AP54105 AL356740.2-201ENST00000601559 647 ntBASIC20.57■□□□□ 0.88
CLNS1AP54105 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLNS1AP54105 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.57■□□□□ 0.88
CLNS1AP54105 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.57■□□□□ 0.88
CLNS1AP54105 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLNS1AP54105 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLNS1AP54105 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLNS1AP54105 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.57■□□□□ 0.88
CLNS1AP54105 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.57■□□□□ 0.88
CLNS1AP54105 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.56■□□□□ 0.88
CLNS1AP54105 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.56■□□□□ 0.88
CLNS1AP54105 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLNS1AP54105 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLNS1AP54105 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLNS1AP54105 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLNS1AP54105 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLNS1AP54105 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLNS1AP54105 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.56■□□□□ 0.88
CLNS1AP54105 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.56■□□□□ 0.88
CLNS1AP54105 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.56■□□□□ 0.88
CLNS1AP54105 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLNS1AP54105 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLNS1AP54105 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.56■□□□□ 0.88
CLNS1AP54105 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLNS1AP54105 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLNS1AP54105 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CLNS1AP54105 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLNS1AP54105 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
CLNS1AP54105 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLNS1AP54105 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLNS1AP54105 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLNS1AP54105 OR7E47P-201ENST00000546390 1422 ntBASIC20.55■□□□□ 0.88
CLNS1AP54105 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLNS1AP54105 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
CLNS1AP54105 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.55■□□□□ 0.88
CLNS1AP54105 AC099791.2-201ENST00000605725 427 ntBASIC20.55■□□□□ 0.88
CLNS1AP54105 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.55■□□□□ 0.88
CLNS1AP54105 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLNS1AP54105 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLNS1AP54105 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLNS1AP54105 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLNS1AP54105 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLNS1AP54105 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.55■□□□□ 0.88
CLNS1AP54105 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLNS1AP54105 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLNS1AP54105 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLNS1AP54105 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLNS1AP54105 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CLNS1AP54105 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.54■□□□□ 0.88
CLNS1AP54105 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLNS1AP54105 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLNS1AP54105 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLNS1AP54105 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLNS1AP54105 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.54■□□□□ 0.88
CLNS1AP54105 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLNS1AP54105 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.54■□□□□ 0.88
CLNS1AP54105 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLNS1AP54105 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLNS1AP54105 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLNS1AP54105 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLNS1AP54105 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLNS1AP54105 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLNS1AP54105 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
CLNS1AP54105 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.53■□□□□ 0.88
CLNS1AP54105 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.53■□□□□ 0.88
CLNS1AP54105 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLNS1AP54105 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLNS1AP54105 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.53■□□□□ 0.88
CLNS1AP54105 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.53■□□□□ 0.88
CLNS1AP54105 AC092171.4-201ENST00000609130 632 ntBASIC20.53■□□□□ 0.88
CLNS1AP54105 AC087239.1-201ENST00000622671 572 ntBASIC20.53■□□□□ 0.88
CLNS1AP54105 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLNS1AP54105 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLNS1AP54105 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLNS1AP54105 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CLNS1AP54105 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.53■□□□□ 0.88
CLNS1AP54105 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLNS1AP54105 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
CLNS1AP54105 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLNS1AP54105 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms