Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.99■□□□□ 0.95
HADHAP40939 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HADHAP40939 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HADHAP40939 POU5F1P4-201ENST00000413175 1085 ntBASIC20.99■□□□□ 0.95
HADHAP40939 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.99■□□□□ 0.95
HADHAP40939 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.99■□□□□ 0.95
HADHAP40939 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.99■□□□□ 0.95
HADHAP40939 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.99■□□□□ 0.95
HADHAP40939 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HADHAP40939 LINC01521-201ENST00000504184 1943 ntBASIC20.99■□□□□ 0.95
HADHAP40939 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.99■□□□□ 0.95
HADHAP40939 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HADHAP40939 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.99■□□□□ 0.95
HADHAP40939 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
HADHAP40939 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.99■□□□□ 0.95
HADHAP40939 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HADHAP40939 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HADHAP40939 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HADHAP40939 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.98■□□□□ 0.95
HADHAP40939 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.98■□□□□ 0.95
HADHAP40939 DUX4L2-201ENST00000561772 1275 ntBASIC20.98■□□□□ 0.95
HADHAP40939 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.98■□□□□ 0.95
HADHAP40939 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
HADHAP40939 DUX4L6-201ENST00000626483 1275 ntBASIC20.98■□□□□ 0.95
HADHAP40939 DUX4L1-201ENST00000627662 1275 ntBASIC20.98■□□□□ 0.95
HADHAP40939 DUX4L8-201ENST00000629013 1275 ntBASIC20.98■□□□□ 0.95
HADHAP40939 DUX4L3-201ENST00000630187 1275 ntBASIC20.98■□□□□ 0.95
HADHAP40939 DUX4L7-201ENST00000630678 1275 ntBASIC20.98■□□□□ 0.95
HADHAP40939 DUX4L5-201ENST00000630834 1275 ntBASIC20.98■□□□□ 0.95
HADHAP40939 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
HADHAP40939 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HADHAP40939 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HADHAP40939 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HADHAP40939 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
HADHAP40939 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HADHAP40939 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 AP004607.4-201ENST00000530158 1459 ntBASIC20.97■□□□□ 0.95
HADHAP40939 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
HADHAP40939 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.97■□□□□ 0.95
HADHAP40939 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.97■□□□□ 0.95
HADHAP40939 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.97■□□□□ 0.95
HADHAP40939 AC104187.1-201ENST00000607510 612 ntBASIC20.97■□□□□ 0.95
HADHAP40939 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
HADHAP40939 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HADHAP40939 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HADHAP40939 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HADHAP40939 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.96■□□□□ 0.95
HADHAP40939 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
HADHAP40939 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HADHAP40939 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HADHAP40939 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HADHAP40939 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HADHAP40939 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HADHAP40939 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.96■□□□□ 0.95
HADHAP40939 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HADHAP40939 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.96■□□□□ 0.95
HADHAP40939 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.96■□□□□ 0.95
HADHAP40939 AC010141.2-201ENST00000452426 721 ntBASIC20.96■□□□□ 0.95
HADHAP40939 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.96■□□□□ 0.95
HADHAP40939 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.96■□□□□ 0.95
HADHAP40939 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HADHAP40939 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.96■□□□□ 0.95
HADHAP40939 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
HADHAP40939 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HADHAP40939 AC004854.2-201ENST00000608450 1441 ntBASIC20.95■□□□□ 0.95
HADHAP40939 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HADHAP40939 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.95■□□□□ 0.94
HADHAP40939 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
HADHAP40939 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HADHAP40939 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HADHAP40939 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.95■□□□□ 0.94
HADHAP40939 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.95■□□□□ 0.94
HADHAP40939 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.95■□□□□ 0.94
HADHAP40939 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.95■□□□□ 0.94
HADHAP40939 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HADHAP40939 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HADHAP40939 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
HADHAP40939 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.95■□□□□ 0.94
HADHAP40939 KRT19P1-201ENST00000405746 1186 ntBASIC20.95■□□□□ 0.94
HADHAP40939 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HADHAP40939 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HADHAP40939 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.95■□□□□ 0.94
HADHAP40939 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.95■□□□□ 0.94
HADHAP40939 AC087623.3-201ENST00000607047 1098 ntBASIC20.95■□□□□ 0.94
HADHAP40939 AC120498.10-201ENST00000621827 505 ntBASIC20.95■□□□□ 0.94
HADHAP40939 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.95■□□□□ 0.94
HADHAP40939 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms