Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CEACAM3P40198 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CEACAM3P40198 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CEACAM3P40198 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CEACAM3P40198 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CEACAM3P40198 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CEACAM3P40198 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CEACAM3P40198 AC022517.1-201ENST00000592429 346 ntBASIC16.94■□□□□ 0.3
CEACAM3P40198 UBE2DNL-204ENST00000602536 740 ntBASIC16.94■□□□□ 0.3
CEACAM3P40198 MYCNOS-205ENST00000641950 531 ntBASIC16.94■□□□□ 0.3
CEACAM3P40198 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CEACAM3P40198 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CEACAM3P40198 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CEACAM3P40198 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CEACAM3P40198 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CEACAM3P40198 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.94■□□□□ 0.3
CEACAM3P40198 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CEACAM3P40198 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CEACAM3P40198 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.93■□□□□ 0.3
CEACAM3P40198 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CEACAM3P40198 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CEACAM3P40198 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CEACAM3P40198 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.93■□□□□ 0.3
CEACAM3P40198 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CEACAM3P40198 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CEACAM3P40198 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CEACAM3P40198 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CEACAM3P40198 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CEACAM3P40198 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CEACAM3P40198 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CEACAM3P40198 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.93■□□□□ 0.3
CEACAM3P40198 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.93■□□□□ 0.3
CEACAM3P40198 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.93■□□□□ 0.3
CEACAM3P40198 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CEACAM3P40198 AL137784.2-201ENST00000607332 1000 ntBASIC16.93■□□□□ 0.3
CEACAM3P40198 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CEACAM3P40198 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CEACAM3P40198 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CEACAM3P40198 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CEACAM3P40198 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.93■□□□□ 0.3
CEACAM3P40198 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CEACAM3P40198 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.92■□□□□ 0.3
CEACAM3P40198 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CEACAM3P40198 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.92■□□□□ 0.3
CEACAM3P40198 SLC7A5P2-201ENST00000553010 536 ntBASIC16.92■□□□□ 0.3
CEACAM3P40198 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.92■□□□□ 0.3
CEACAM3P40198 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.92■□□□□ 0.3
CEACAM3P40198 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.92■□□□□ 0.3
CEACAM3P40198 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.92■□□□□ 0.3
CEACAM3P40198 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CEACAM3P40198 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.92■□□□□ 0.3
CEACAM3P40198 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CEACAM3P40198 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.92■□□□□ 0.3
CEACAM3P40198 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CEACAM3P40198 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CEACAM3P40198 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CEACAM3P40198 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CEACAM3P40198 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CEACAM3P40198 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CEACAM3P40198 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CEACAM3P40198 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CEACAM3P40198 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CEACAM3P40198 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CEACAM3P40198 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.91■□□□□ 0.3
CEACAM3P40198 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CEACAM3P40198 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CEACAM3P40198 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.91■□□□□ 0.3
CEACAM3P40198 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.91■□□□□ 0.3
CEACAM3P40198 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.91■□□□□ 0.3
CEACAM3P40198 BID-214ENST00000617586 542 ntTSL 5 BASIC16.91■□□□□ 0.3
CEACAM3P40198 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CEACAM3P40198 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CEACAM3P40198 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CEACAM3P40198 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CEACAM3P40198 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CEACAM3P40198 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.91■□□□□ 0.3
CEACAM3P40198 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CEACAM3P40198 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CEACAM3P40198 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.9■□□□□ 0.3
CEACAM3P40198 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CEACAM3P40198 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CEACAM3P40198 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CEACAM3P40198 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CEACAM3P40198 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.9■□□□□ 0.3
CEACAM3P40198 AC006015.1-201ENST00000429970 570 ntBASIC16.9■□□□□ 0.3
CEACAM3P40198 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms