Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDF1P27539 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
GDF1P27539 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDF1P27539 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
GDF1P27539 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
GDF1P27539 CDV3P1-201ENST00000471403 739 ntBASIC18.87■□□□□ 0.61
GDF1P27539 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.87■□□□□ 0.61
GDF1P27539 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
GDF1P27539 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDF1P27539 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GDF1P27539 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.86■□□□□ 0.61
GDF1P27539 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
GDF1P27539 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF1P27539 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
GDF1P27539 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.86■□□□□ 0.61
GDF1P27539 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.86■□□□□ 0.61
GDF1P27539 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF1P27539 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
GDF1P27539 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF1P27539 AC091799.1-201ENST00000422823 811 ntBASIC18.86■□□□□ 0.61
GDF1P27539 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.86■□□□□ 0.61
GDF1P27539 AC093787.1-201ENST00000450396 207 ntBASIC18.86■□□□□ 0.61
GDF1P27539 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.86■□□□□ 0.61
GDF1P27539 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.86■□□□□ 0.61
GDF1P27539 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.86■□□□□ 0.61
GDF1P27539 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.86■□□□□ 0.61
GDF1P27539 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.86■□□□□ 0.61
GDF1P27539 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDF1P27539 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
GDF1P27539 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
GDF1P27539 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GDF1P27539 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GDF1P27539 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.85■□□□□ 0.61
GDF1P27539 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GDF1P27539 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
GDF1P27539 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDF1P27539 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDF1P27539 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.85■□□□□ 0.61
GDF1P27539 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GDF1P27539 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDF1P27539 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GDF1P27539 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.85■□□□□ 0.61
GDF1P27539 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDF1P27539 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GDF1P27539 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDF1P27539 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF1P27539 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.84■□□□□ 0.61
GDF1P27539 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF1P27539 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF1P27539 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF1P27539 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GDF1P27539 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF1P27539 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF1P27539 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF1P27539 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF1P27539 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
GDF1P27539 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.84■□□□□ 0.61
GDF1P27539 RARRES2P4-201ENST00000514074 484 ntBASIC18.84■□□□□ 0.61
GDF1P27539 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GDF1P27539 AL138781.1-201ENST00000566567 1274 ntBASIC18.84■□□□□ 0.61
GDF1P27539 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.84■□□□□ 0.61
GDF1P27539 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.84■□□□□ 0.61
GDF1P27539 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.84■□□□□ 0.61
GDF1P27539 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF1P27539 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF1P27539 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GDF1P27539 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
GDF1P27539 AC244015.2-201ENST00000616358 1861 ntBASIC18.84■□□□□ 0.61
GDF1P27539 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDF1P27539 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.83■□□□□ 0.61
GDF1P27539 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
GDF1P27539 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GDF1P27539 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GDF1P27539 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GDF1P27539 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
GDF1P27539 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
GDF1P27539 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GDF1P27539 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GDF1P27539 AL512625.2-201ENST00000417533 625 ntBASIC18.83■□□□□ 0.6
GDF1P27539 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.83■□□□□ 0.6
GDF1P27539 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.83■□□□□ 0.6
GDF1P27539 AC142086.2-201ENST00000569753 217 ntBASIC18.83■□□□□ 0.6
GDF1P27539 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.83■□□□□ 0.6
GDF1P27539 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.83■□□□□ 0.6
GDF1P27539 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GDF1P27539 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GDF1P27539 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
GDF1P27539 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
GDF1P27539 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GDF1P27539 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDF1P27539 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDF1P27539 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.82■□□□□ 0.6
GDF1P27539 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDF1P27539 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDF1P27539 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDF1P27539 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.82■□□□□ 0.6
GDF1P27539 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GDF1P27539 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDF1P27539 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.82■□□□□ 0.6
GDF1P27539 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms