Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACKR3P25106 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ACKR3P25106 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ACKR3P25106 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.02■□□□□ 0.48
ACKR3P25106 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.02■□□□□ 0.48
ACKR3P25106 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACKR3P25106 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ACKR3P25106 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACKR3P25106 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.02■□□□□ 0.47
ACKR3P25106 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACKR3P25106 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
ACKR3P25106 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
ACKR3P25106 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACKR3P25106 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.01■□□□□ 0.47
ACKR3P25106 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
ACKR3P25106 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
ACKR3P25106 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACKR3P25106 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACKR3P25106 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACKR3P25106 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACKR3P25106 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACKR3P25106 AC061975.6-201ENST00000579045 1553 ntBASIC18.01■□□□□ 0.47
ACKR3P25106 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACKR3P25106 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ACKR3P25106 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACKR3P25106 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACKR3P25106 AC079140.4-201ENST00000507448 529 ntBASIC18.01■□□□□ 0.47
ACKR3P25106 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.01■□□□□ 0.47
ACKR3P25106 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.01■□□□□ 0.47
ACKR3P25106 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ACKR3P25106 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.01■□□□□ 0.47
ACKR3P25106 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACKR3P25106 AL157384.1-201ENST00000445995 2473 ntBASIC18.01■□□□□ 0.47
ACKR3P25106 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ACKR3P25106 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACKR3P25106 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACKR3P25106 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACKR3P25106 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACKR3P25106 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACKR3P25106 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ACKR3P25106 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACKR3P25106 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18■□□□□ 0.47
ACKR3P25106 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18■□□□□ 0.47
ACKR3P25106 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18■□□□□ 0.47
ACKR3P25106 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACKR3P25106 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18■□□□□ 0.47
ACKR3P25106 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18■□□□□ 0.47
ACKR3P25106 KRT87P-202ENST00000534226 1464 ntBASIC18■□□□□ 0.47
ACKR3P25106 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACKR3P25106 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACKR3P25106 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ACKR3P25106 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ACKR3P25106 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18■□□□□ 0.47
ACKR3P25106 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACKR3P25106 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ACKR3P25106 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ACKR3P25106 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACKR3P25106 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACKR3P25106 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.99■□□□□ 0.47
ACKR3P25106 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.99■□□□□ 0.47
ACKR3P25106 PLK5-205ENST00000642079 1969 ntBASIC17.99■□□□□ 0.47
ACKR3P25106 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.99■□□□□ 0.47
ACKR3P25106 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACKR3P25106 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ACKR3P25106 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACKR3P25106 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.99■□□□□ 0.47
ACKR3P25106 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACKR3P25106 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACKR3P25106 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
ACKR3P25106 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACKR3P25106 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.99■□□□□ 0.47
ACKR3P25106 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.99■□□□□ 0.47
ACKR3P25106 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.98■□□□□ 0.47
ACKR3P25106 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACKR3P25106 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ACKR3P25106 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
ACKR3P25106 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACKR3P25106 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACKR3P25106 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACKR3P25106 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.98■□□□□ 0.47
ACKR3P25106 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.98■□□□□ 0.47
ACKR3P25106 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.98■□□□□ 0.47
ACKR3P25106 LINC02228-203ENST00000641970 1355 ntBASIC17.98■□□□□ 0.47
ACKR3P25106 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.98■□□□□ 0.47
ACKR3P25106 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ACKR3P25106 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ACKR3P25106 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ACKR3P25106 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACKR3P25106 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.98■□□□□ 0.47
ACKR3P25106 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ACKR3P25106 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACKR3P25106 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ACKR3P25106 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ACKR3P25106 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACKR3P25106 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ACKR3P25106 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ACKR3P25106 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ACKR3P25106 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACKR3P25106 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACKR3P25106 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms