Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
HLA-DPA1P20036 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DPA1P20036 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.98■□□□□ 0.95
HLA-DPA1P20036 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DPA1P20036 AC245052.3-201ENST00000450182 901 ntBASIC20.98■□□□□ 0.95
HLA-DPA1P20036 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.98■□□□□ 0.95
HLA-DPA1P20036 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.98■□□□□ 0.95
HLA-DPA1P20036 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DPA1P20036 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HLA-DPA1P20036 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DPA1P20036 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.98■□□□□ 0.95
HLA-DPA1P20036 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.98■□□□□ 0.95
HLA-DPA1P20036 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DPA1P20036 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HLA-DPA1P20036 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HLA-DPA1P20036 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.97■□□□□ 0.95
HLA-DPA1P20036 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DPA1P20036 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DPA1P20036 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-DPA1P20036 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-DPA1P20036 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DPA1P20036 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-DPA1P20036 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DPA1P20036 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DPA1P20036 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DPA1P20036 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HLA-DPA1P20036 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DPA1P20036 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DPA1P20036 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DPA1P20036 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DPA1P20036 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DPA1P20036 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.96■□□□□ 0.95
HLA-DPA1P20036 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.96■□□□□ 0.95
HLA-DPA1P20036 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DPA1P20036 RARRES2P11-201ENST00000635158 484 ntBASIC20.96■□□□□ 0.95
HLA-DPA1P20036 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.96■□□□□ 0.95
HLA-DPA1P20036 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DPA1P20036 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DPA1P20036 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DPA1P20036 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
HLA-DPA1P20036 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DPA1P20036 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DPA1P20036 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
HLA-DPA1P20036 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DPA1P20036 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DPA1P20036 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DPA1P20036 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.95■□□□□ 0.94
HLA-DPA1P20036 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.95■□□□□ 0.94
HLA-DPA1P20036 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DPA1P20036 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DPA1P20036 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.95■□□□□ 0.94
HLA-DPA1P20036 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HLA-DPA1P20036 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DPA1P20036 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DPA1P20036 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 AL162430.1-201ENST00000480705 870 ntBASIC20.94■□□□□ 0.94
HLA-DPA1P20036 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 UBE2DNL-204ENST00000602536 740 ntBASIC20.94■□□□□ 0.94
HLA-DPA1P20036 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DPA1P20036 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DPA1P20036 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
HLA-DPA1P20036 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DPA1P20036 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.93■□□□□ 0.94
HLA-DPA1P20036 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DPA1P20036 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.93■□□□□ 0.94
HLA-DPA1P20036 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.93■□□□□ 0.94
HLA-DPA1P20036 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.93■□□□□ 0.94
HLA-DPA1P20036 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-DPA1P20036 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.93■□□□□ 0.94
HLA-DPA1P20036 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DPA1P20036 MYCNOS-205ENST00000641950 531 ntBASIC20.93■□□□□ 0.94
HLA-DPA1P20036 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DPA1P20036 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
HLA-DPA1P20036 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DPA1P20036 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.93■□□□□ 0.94
HLA-DPA1P20036 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DPA1P20036 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DPA1P20036 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.92■□□□□ 0.94
HLA-DPA1P20036 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DPA1P20036 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms