Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC1P18887 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.69■□□□□ 0.9
XRCC1P18887 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC1P18887 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
XRCC1P18887 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC1P18887 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.69■□□□□ 0.9
XRCC1P18887 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.69■□□□□ 0.9
XRCC1P18887 AC010141.2-201ENST00000452426 721 ntBASIC20.69■□□□□ 0.9
XRCC1P18887 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.69■□□□□ 0.9
XRCC1P18887 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC1P18887 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
XRCC1P18887 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
XRCC1P18887 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC1P18887 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.69■□□□□ 0.9
XRCC1P18887 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC1P18887 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
XRCC1P18887 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC1P18887 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC1P18887 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.69■□□□□ 0.9
XRCC1P18887 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC1P18887 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC1P18887 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
XRCC1P18887 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.68■□□□□ 0.9
XRCC1P18887 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.68■□□□□ 0.9
XRCC1P18887 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.68■□□□□ 0.9
XRCC1P18887 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.68■□□□□ 0.9
XRCC1P18887 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.68■□□□□ 0.9
XRCC1P18887 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.68■□□□□ 0.9
XRCC1P18887 AC011767.1-201ENST00000617410 1153 ntBASIC20.68■□□□□ 0.9
XRCC1P18887 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.68■□□□□ 0.9
XRCC1P18887 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
XRCC1P18887 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
XRCC1P18887 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 LINC01521-201ENST00000504184 1943 ntBASIC20.68■□□□□ 0.9
XRCC1P18887 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
XRCC1P18887 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
XRCC1P18887 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.68■□□□□ 0.9
XRCC1P18887 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC1P18887 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.68■□□□□ 0.9
XRCC1P18887 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
XRCC1P18887 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
XRCC1P18887 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XRCC1P18887 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
XRCC1P18887 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
XRCC1P18887 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
XRCC1P18887 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.67■□□□□ 0.9
XRCC1P18887 CDCA4P2-201ENST00000441182 718 ntBASIC20.67■□□□□ 0.9
XRCC1P18887 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.67■□□□□ 0.9
XRCC1P18887 AC073111.5-205ENST00000641717 521 ntBASIC20.67■□□□□ 0.9
XRCC1P18887 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.67■□□□□ 0.9
XRCC1P18887 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XRCC1P18887 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.67■□□□□ 0.9
XRCC1P18887 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XRCC1P18887 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XRCC1P18887 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
XRCC1P18887 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
XRCC1P18887 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.67■□□□□ 0.9
XRCC1P18887 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
XRCC1P18887 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
XRCC1P18887 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
XRCC1P18887 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XRCC1P18887 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XRCC1P18887 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
XRCC1P18887 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XRCC1P18887 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XRCC1P18887 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
XRCC1P18887 UBE2DNL-204ENST00000602536 740 ntBASIC20.66■□□□□ 0.9
XRCC1P18887 RAP2CP1-201ENST00000605103 478 ntBASIC20.66■□□□□ 0.9
XRCC1P18887 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.66■□□□□ 0.9
XRCC1P18887 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.66■□□□□ 0.9
XRCC1P18887 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
XRCC1P18887 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
XRCC1P18887 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
XRCC1P18887 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
XRCC1P18887 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
XRCC1P18887 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
XRCC1P18887 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
XRCC1P18887 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
XRCC1P18887 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
XRCC1P18887 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.65■□□□□ 0.9
XRCC1P18887 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
XRCC1P18887 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.65■□□□□ 0.9
XRCC1P18887 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.65■□□□□ 0.9
XRCC1P18887 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
XRCC1P18887 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
XRCC1P18887 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms