Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.82■□□□□ 0.28
DEFA4P12838 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA4P12838 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA4P12838 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA4P12838 AL391422.3-201ENST00000603791 2761 ntBASIC16.82■□□□□ 0.28
DEFA4P12838 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA4P12838 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
DEFA4P12838 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.82■□□□□ 0.28
DEFA4P12838 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA4P12838 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA4P12838 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
DEFA4P12838 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.82■□□□□ 0.28
DEFA4P12838 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.82■□□□□ 0.28
DEFA4P12838 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA4P12838 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA4P12838 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.82■□□□□ 0.28
DEFA4P12838 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA4P12838 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA4P12838 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA4P12838 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
DEFA4P12838 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
DEFA4P12838 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.82■□□□□ 0.28
DEFA4P12838 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.82■□□□□ 0.28
DEFA4P12838 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA4P12838 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.82■□□□□ 0.28
DEFA4P12838 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.82■□□□□ 0.28
DEFA4P12838 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
DEFA4P12838 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.81■□□□□ 0.28
DEFA4P12838 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.81■□□□□ 0.28
DEFA4P12838 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.81■□□□□ 0.28
DEFA4P12838 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
DEFA4P12838 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.81■□□□□ 0.28
DEFA4P12838 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.81■□□□□ 0.28
DEFA4P12838 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA4P12838 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA4P12838 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA4P12838 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.8■□□□□ 0.28
DEFA4P12838 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA4P12838 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
DEFA4P12838 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA4P12838 TSPY26P-201ENST00000476365 1326 ntBASIC16.8■□□□□ 0.28
DEFA4P12838 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA4P12838 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.8■□□□□ 0.28
DEFA4P12838 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
DEFA4P12838 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA4P12838 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.8■□□□□ 0.28
DEFA4P12838 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.8■□□□□ 0.28
DEFA4P12838 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.8■□□□□ 0.28
DEFA4P12838 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.8■□□□□ 0.28
DEFA4P12838 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.8■□□□□ 0.28
DEFA4P12838 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.8■□□□□ 0.28
DEFA4P12838 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
DEFA4P12838 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
DEFA4P12838 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA4P12838 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.8■□□□□ 0.28
DEFA4P12838 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
DEFA4P12838 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
DEFA4P12838 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.8■□□□□ 0.28
DEFA4P12838 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA4P12838 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA4P12838 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.8■□□□□ 0.28
DEFA4P12838 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DEFA4P12838 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.79■□□□□ 0.28
DEFA4P12838 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DEFA4P12838 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DEFA4P12838 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
DEFA4P12838 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DEFA4P12838 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.79■□□□□ 0.28
DEFA4P12838 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DEFA4P12838 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.79■□□□□ 0.28
DEFA4P12838 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DEFA4P12838 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.79■□□□□ 0.28
DEFA4P12838 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DEFA4P12838 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DEFA4P12838 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DEFA4P12838 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DEFA4P12838 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
DEFA4P12838 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DEFA4P12838 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DEFA4P12838 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
DEFA4P12838 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.79■□□□□ 0.28
DEFA4P12838 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DEFA4P12838 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms