Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DQB1P01920 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HLA-DQB1P01920 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
HLA-DQB1P01920 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DQB1P01920 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 AC133637.1-201ENST00000624115 1537 ntBASIC17.98■□□□□ 0.47
HLA-DQB1P01920 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 AC068587.7-201ENST00000641602 218 ntBASIC17.98■□□□□ 0.47
HLA-DQB1P01920 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQB1P01920 LETM1P2-201ENST00000597330 2178 ntBASIC17.97■□□□□ 0.47
HLA-DQB1P01920 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 MIR4787-201ENST00000607364 84 ntBASIC17.97■□□□□ 0.47
HLA-DQB1P01920 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQB1P01920 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DQB1P01920 AC004408.2-201ENST00000623613 2777 ntBASIC17.96■□□□□ 0.46
HLA-DQB1P01920 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 AC010997.5-201ENST00000609182 354 ntBASIC17.95■□□□□ 0.46
HLA-DQB1P01920 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 TCF3P1-201ENST00000423021 1937 ntBASIC17.95■□□□□ 0.46
HLA-DQB1P01920 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
HLA-DQB1P01920 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms