Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRBC1P01850 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRBC1P01850 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.87■□□□□ 0.93
TRBC1P01850 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.87■□□□□ 0.93
TRBC1P01850 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TRBC1P01850 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBC1P01850 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.87■□□□□ 0.93
TRBC1P01850 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.87■□□□□ 0.93
TRBC1P01850 AC007322.4-201ENST00000509611 723 ntBASIC20.87■□□□□ 0.93
TRBC1P01850 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.87■□□□□ 0.93
TRBC1P01850 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.87■□□□□ 0.93
TRBC1P01850 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBC1P01850 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBC1P01850 CLDN5-201ENST00000403084 2357 ntBASIC20.87■□□□□ 0.93
TRBC1P01850 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBC1P01850 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBC1P01850 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRBC1P01850 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBC1P01850 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRBC1P01850 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRBC1P01850 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRBC1P01850 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.86■□□□□ 0.93
TRBC1P01850 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.86■□□□□ 0.93
TRBC1P01850 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRBC1P01850 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBC1P01850 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBC1P01850 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBC1P01850 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.86■□□□□ 0.93
TRBC1P01850 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBC1P01850 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.86■□□□□ 0.93
TRBC1P01850 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TRBC1P01850 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBC1P01850 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.85■□□□□ 0.93
TRBC1P01850 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBC1P01850 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRBC1P01850 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.85■□□□□ 0.93
TRBC1P01850 AL049796.1-201ENST00000565336 1766 ntBASIC20.85■□□□□ 0.93
TRBC1P01850 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRBC1P01850 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.85■□□□□ 0.93
TRBC1P01850 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TRBC1P01850 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.85■□□□□ 0.93
TRBC1P01850 AC091799.1-201ENST00000422823 811 ntBASIC20.85■□□□□ 0.93
TRBC1P01850 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.85■□□□□ 0.93
TRBC1P01850 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.85■□□□□ 0.93
TRBC1P01850 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.85■□□□□ 0.93
TRBC1P01850 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TRBC1P01850 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBC1P01850 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBC1P01850 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.85■□□□□ 0.93
TRBC1P01850 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TRBC1P01850 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBC1P01850 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRBC1P01850 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBC1P01850 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.84■□□□□ 0.93
TRBC1P01850 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TRBC1P01850 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBC1P01850 AC007322.1-201ENST00000426983 750 ntBASIC20.84■□□□□ 0.93
TRBC1P01850 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRBC1P01850 AC026185.1-201ENST00000445748 174 ntBASIC20.84■□□□□ 0.93
TRBC1P01850 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.84■□□□□ 0.93
TRBC1P01850 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.84■□□□□ 0.93
TRBC1P01850 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TRBC1P01850 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TRBC1P01850 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRBC1P01850 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBC1P01850 AF106564.1-201ENST00000607058 2553 ntBASIC20.84■□□□□ 0.93
TRBC1P01850 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRBC1P01850 AC007375.3-201ENST00000600936 2314 ntBASIC20.83■□□□□ 0.93
TRBC1P01850 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBC1P01850 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBC1P01850 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TRBC1P01850 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBC1P01850 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
TRBC1P01850 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TRBC1P01850 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.83■□□□□ 0.93
TRBC1P01850 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.83■□□□□ 0.93
TRBC1P01850 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.83■□□□□ 0.93
TRBC1P01850 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBC1P01850 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRBC1P01850 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.83■□□□□ 0.92
TRBC1P01850 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRBC1P01850 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.82■□□□□ 0.92
TRBC1P01850 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBC1P01850 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.82■□□□□ 0.92
TRBC1P01850 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
TRBC1P01850 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBC1P01850 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.82■□□□□ 0.92
TRBC1P01850 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.82■□□□□ 0.92
TRBC1P01850 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
TRBC1P01850 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRBC1P01850 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.82■□□□□ 0.92
TRBC1P01850 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRBC1P01850 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRBC1P01850 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.82■□□□□ 0.92
TRBC1P01850 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBC1P01850 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBC1P01850 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TRBC1P01850 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
TRBC1P01850 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBC1P01850 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms