Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDGFBP01127 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.15■□□□□ 0.98
PDGFBP01127 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDGFBP01127 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.15■□□□□ 0.98
PDGFBP01127 AC110285.5-201ENST00000611501 352 ntBASIC21.15■□□□□ 0.98
PDGFBP01127 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
PDGFBP01127 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PDGFBP01127 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
PDGFBP01127 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFBP01127 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFBP01127 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFBP01127 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFBP01127 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.14■□□□□ 0.97
PDGFBP01127 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.14■□□□□ 0.97
PDGFBP01127 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.14■□□□□ 0.97
PDGFBP01127 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.14■□□□□ 0.97
PDGFBP01127 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFBP01127 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFBP01127 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFBP01127 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFBP01127 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFBP01127 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFBP01127 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFBP01127 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFBP01127 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.13■□□□□ 0.97
PDGFBP01127 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PDGFBP01127 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFBP01127 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFBP01127 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PDGFBP01127 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.13■□□□□ 0.97
PDGFBP01127 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.13■□□□□ 0.97
PDGFBP01127 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.13■□□□□ 0.97
PDGFBP01127 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFBP01127 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.13■□□□□ 0.97
PDGFBP01127 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFBP01127 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFBP01127 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.12■□□□□ 0.97
PDGFBP01127 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFBP01127 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFBP01127 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.12■□□□□ 0.97
PDGFBP01127 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
PDGFBP01127 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFBP01127 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.12■□□□□ 0.97
PDGFBP01127 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFBP01127 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFBP01127 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFBP01127 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFBP01127 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
PDGFBP01127 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFBP01127 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFBP01127 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
PDGFBP01127 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFBP01127 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.11■□□□□ 0.97
PDGFBP01127 AC245052.3-201ENST00000450182 901 ntBASIC21.11■□□□□ 0.97
PDGFBP01127 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.11■□□□□ 0.97
PDGFBP01127 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PDGFBP01127 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.11■□□□□ 0.97
PDGFBP01127 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.11■□□□□ 0.97
PDGFBP01127 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.11■□□□□ 0.97
PDGFBP01127 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
PDGFBP01127 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.11■□□□□ 0.97
PDGFBP01127 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.11■□□□□ 0.97
PDGFBP01127 AC092865.7-201ENST00000641832 219 ntBASIC21.11■□□□□ 0.97
PDGFBP01127 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFBP01127 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
PDGFBP01127 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.1■□□□□ 0.97
PDGFBP01127 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PDGFBP01127 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PDGFBP01127 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDGFBP01127 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.1■□□□□ 0.97
PDGFBP01127 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.1■□□□□ 0.97
PDGFBP01127 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.1■□□□□ 0.97
PDGFBP01127 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDGFBP01127 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.1■□□□□ 0.97
PDGFBP01127 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.1■□□□□ 0.97
PDGFBP01127 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDGFBP01127 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.1■□□□□ 0.97
PDGFBP01127 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.1■□□□□ 0.97
PDGFBP01127 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.09■□□□□ 0.97
PDGFBP01127 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDGFBP01127 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDGFBP01127 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.09■□□□□ 0.97
PDGFBP01127 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDGFBP01127 MMP23A-201ENST00000234610 1017 ntBASIC21.09■□□□□ 0.97
PDGFBP01127 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDGFBP01127 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
PDGFBP01127 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.09■□□□□ 0.97
PDGFBP01127 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.09■□□□□ 0.97
PDGFBP01127 RARRES2P10-201ENST00000564312 460 ntBASIC21.09■□□□□ 0.97
PDGFBP01127 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.09■□□□□ 0.97
PDGFBP01127 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDGFBP01127 AC026471.5-201ENST00000615068 467 ntBASIC21.09■□□□□ 0.97
PDGFBP01127 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDGFBP01127 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDGFBP01127 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.08■□□□□ 0.97
PDGFBP01127 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDGFBP01127 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.08■□□□□ 0.97
PDGFBP01127 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDGFBP01127 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDGFBP01127 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms