Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCMT2O60294 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.91■□□□□ 0.78
LCMT2O60294 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LCMT2O60294 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.9■□□□□ 0.78
LCMT2O60294 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.9■□□□□ 0.78
LCMT2O60294 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LCMT2O60294 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.9■□□□□ 0.78
LCMT2O60294 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
LCMT2O60294 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.9■□□□□ 0.78
LCMT2O60294 AC245052.3-201ENST00000450182 901 ntBASIC19.9■□□□□ 0.78
LCMT2O60294 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.9■□□□□ 0.78
LCMT2O60294 TERF1P5-201ENST00000477545 1207 ntBASIC19.9■□□□□ 0.78
LCMT2O60294 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.9■□□□□ 0.78
LCMT2O60294 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
LCMT2O60294 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.9■□□□□ 0.78
LCMT2O60294 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.9■□□□□ 0.78
LCMT2O60294 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LCMT2O60294 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LCMT2O60294 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LCMT2O60294 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LCMT2O60294 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LCMT2O60294 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
LCMT2O60294 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LCMT2O60294 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LCMT2O60294 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LCMT2O60294 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LCMT2O60294 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LCMT2O60294 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LCMT2O60294 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.89■□□□□ 0.77
LCMT2O60294 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LCMT2O60294 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.89■□□□□ 0.77
LCMT2O60294 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LCMT2O60294 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
LCMT2O60294 AC243732.1-201ENST00000612648 864 ntBASIC19.89■□□□□ 0.77
LCMT2O60294 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
LCMT2O60294 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.89■□□□□ 0.77
LCMT2O60294 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.88■□□□□ 0.77
LCMT2O60294 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LCMT2O60294 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LCMT2O60294 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LCMT2O60294 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LCMT2O60294 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LCMT2O60294 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.88■□□□□ 0.77
LCMT2O60294 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.88■□□□□ 0.77
LCMT2O60294 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LCMT2O60294 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LCMT2O60294 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.88■□□□□ 0.77
LCMT2O60294 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LCMT2O60294 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LCMT2O60294 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.88■□□□□ 0.77
LCMT2O60294 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LCMT2O60294 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.88■□□□□ 0.77
LCMT2O60294 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.88■□□□□ 0.77
LCMT2O60294 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LCMT2O60294 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LCMT2O60294 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.88■□□□□ 0.77
LCMT2O60294 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LCMT2O60294 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.87■□□□□ 0.77
LCMT2O60294 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.87■□□□□ 0.77
LCMT2O60294 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LCMT2O60294 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LCMT2O60294 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LCMT2O60294 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LCMT2O60294 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LCMT2O60294 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.87■□□□□ 0.77
LCMT2O60294 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.87■□□□□ 0.77
LCMT2O60294 AC091799.1-201ENST00000422823 811 ntBASIC19.87■□□□□ 0.77
LCMT2O60294 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LCMT2O60294 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
LCMT2O60294 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.87■□□□□ 0.77
LCMT2O60294 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.87■□□□□ 0.77
LCMT2O60294 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.87■□□□□ 0.77
LCMT2O60294 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.87■□□□□ 0.77
LCMT2O60294 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
LCMT2O60294 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LCMT2O60294 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LCMT2O60294 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LCMT2O60294 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LCMT2O60294 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LCMT2O60294 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LCMT2O60294 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LCMT2O60294 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LCMT2O60294 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LCMT2O60294 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.86■□□□□ 0.77
LCMT2O60294 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LCMT2O60294 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
LCMT2O60294 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.86■□□□□ 0.77
LCMT2O60294 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LCMT2O60294 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
LCMT2O60294 AC080038.1-201ENST00000611274 1154 ntBASIC19.86■□□□□ 0.77
LCMT2O60294 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LCMT2O60294 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LCMT2O60294 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LCMT2O60294 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
LCMT2O60294 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LCMT2O60294 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LCMT2O60294 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LCMT2O60294 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LCMT2O60294 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LCMT2O60294 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms