Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH7O60245 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
PCDH7O60245 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PCDH7O60245 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH7O60245 ZNRF2P3-201ENST00000424200 374 ntBASIC19.83■□□□□ 0.77
PCDH7O60245 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDH7O60245 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH7O60245 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH7O60245 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH7O60245 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.83■□□□□ 0.76
PCDH7O60245 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH7O60245 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.83■□□□□ 0.76
PCDH7O60245 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH7O60245 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH7O60245 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH7O60245 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH7O60245 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH7O60245 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH7O60245 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH7O60245 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH7O60245 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH7O60245 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH7O60245 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH7O60245 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH7O60245 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH7O60245 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH7O60245 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PCDH7O60245 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCDH7O60245 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH7O60245 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH7O60245 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH7O60245 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.82■□□□□ 0.76
PCDH7O60245 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.82■□□□□ 0.76
PCDH7O60245 TERF1P2-201ENST00000583350 1212 ntBASIC19.82■□□□□ 0.76
PCDH7O60245 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH7O60245 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH7O60245 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDH7O60245 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH7O60245 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH7O60245 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH7O60245 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH7O60245 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH7O60245 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDH7O60245 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDH7O60245 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PCDH7O60245 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PCDH7O60245 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDH7O60245 AC010141.2-201ENST00000452426 721 ntBASIC19.81■□□□□ 0.76
PCDH7O60245 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.81■□□□□ 0.76
PCDH7O60245 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH7O60245 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH7O60245 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH7O60245 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH7O60245 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH7O60245 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PCDH7O60245 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH7O60245 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH7O60245 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDH7O60245 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH7O60245 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PCDH7O60245 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDH7O60245 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDH7O60245 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
PCDH7O60245 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH7O60245 AC073130.3-201ENST00000624389 2278 ntBASIC19.8■□□□□ 0.76
PCDH7O60245 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDH7O60245 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDH7O60245 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDH7O60245 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDH7O60245 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDH7O60245 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDH7O60245 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDH7O60245 AC104187.1-201ENST00000607510 612 ntBASIC19.8■□□□□ 0.76
PCDH7O60245 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDH7O60245 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
PCDH7O60245 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH7O60245 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH7O60245 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDH7O60245 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH7O60245 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH7O60245 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH7O60245 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PCDH7O60245 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH7O60245 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH7O60245 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH7O60245 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH7O60245 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH7O60245 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH7O60245 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PCDH7O60245 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH7O60245 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH7O60245 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH7O60245 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH7O60245 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH7O60245 CCDC92B-201ENST00000575506 885 ntBASIC19.79■□□□□ 0.76
PCDH7O60245 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH7O60245 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH7O60245 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH7O60245 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PCDH7O60245 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms