Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PAX4O43316 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX4O43316 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.81□□□□□ -0.04
PAX4O43316 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX4O43316 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PAX4O43316 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX4O43316 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.81□□□□□ -0.04
PAX4O43316 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX4O43316 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX4O43316 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX4O43316 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.8□□□□□ -0.04
PAX4O43316 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.8□□□□□ -0.04
PAX4O43316 Z98882.1-201ENST00000622160 2253 ntBASIC14.8□□□□□ -0.04
PAX4O43316 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PAX4O43316 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.8□□□□□ -0.04
PAX4O43316 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.8□□□□□ -0.04
PAX4O43316 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.8□□□□□ -0.04
PAX4O43316 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.8□□□□□ -0.04
PAX4O43316 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.8□□□□□ -0.04
PAX4O43316 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.8□□□□□ -0.04
PAX4O43316 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.8□□□□□ -0.04
PAX4O43316 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.8□□□□□ -0.04
PAX4O43316 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 AC008175.2-201ENST00000612840 297 ntBASIC14.8□□□□□ -0.04
PAX4O43316 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.8□□□□□ -0.04
PAX4O43316 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.8□□□□□ -0.04
PAX4O43316 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.8□□□□□ -0.04
PAX4O43316 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.8□□□□□ -0.04
PAX4O43316 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PAX4O43316 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.8□□□□□ -0.04
PAX4O43316 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PAX4O43316 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX4O43316 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX4O43316 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX4O43316 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX4O43316 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX4O43316 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.79□□□□□ -0.04
PAX4O43316 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PAX4O43316 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PAX4O43316 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.79□□□□□ -0.04
PAX4O43316 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.79□□□□□ -0.04
PAX4O43316 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PAX4O43316 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX4O43316 EEF1DP3-203ENST00000566025 782 ntBASIC14.79□□□□□ -0.04
PAX4O43316 RARRES2P6-201ENST00000567333 442 ntBASIC14.79□□□□□ -0.04
PAX4O43316 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.79□□□□□ -0.04
PAX4O43316 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PAX4O43316 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX4O43316 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX4O43316 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PAX4O43316 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PAX4O43316 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PAX4O43316 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PAX4O43316 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC14.78□□□□□ -0.04
PAX4O43316 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.78□□□□□ -0.04
PAX4O43316 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.78□□□□□ -0.04
PAX4O43316 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.78□□□□□ -0.04
PAX4O43316 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.78□□□□□ -0.04
PAX4O43316 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PAX4O43316 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.78□□□□□ -0.04
PAX4O43316 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.78□□□□□ -0.04
PAX4O43316 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.78□□□□□ -0.04
PAX4O43316 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.78□□□□□ -0.04
PAX4O43316 AC087623.3-201ENST00000607047 1098 ntBASIC14.78□□□□□ -0.04
PAX4O43316 AC120498.10-201ENST00000621827 505 ntBASIC14.78□□□□□ -0.04
PAX4O43316 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PAX4O43316 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms