Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.81■□□□□ 0.6
SMAD9O15198 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD9O15198 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD9O15198 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.81■□□□□ 0.6
SMAD9O15198 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.81■□□□□ 0.6
SMAD9O15198 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.81■□□□□ 0.6
SMAD9O15198 IKBKGP1-201ENST00000612193 1073 ntBASIC18.81■□□□□ 0.6
SMAD9O15198 AC008175.2-201ENST00000612840 297 ntBASIC18.81■□□□□ 0.6
SMAD9O15198 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD9O15198 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SMAD9O15198 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD9O15198 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SMAD9O15198 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD9O15198 AC061975.6-201ENST00000579045 1553 ntBASIC18.81■□□□□ 0.6
SMAD9O15198 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD9O15198 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD9O15198 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD9O15198 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
SMAD9O15198 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
SMAD9O15198 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD9O15198 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.8■□□□□ 0.6
SMAD9O15198 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.8■□□□□ 0.6
SMAD9O15198 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD9O15198 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.8■□□□□ 0.6
SMAD9O15198 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD9O15198 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.8■□□□□ 0.6
SMAD9O15198 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.8■□□□□ 0.6
SMAD9O15198 AC092437.1-201ENST00000624794 1048 ntBASIC18.8■□□□□ 0.6
SMAD9O15198 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD9O15198 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD9O15198 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.8■□□□□ 0.6
SMAD9O15198 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD9O15198 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD9O15198 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.8■□□□□ 0.6
SMAD9O15198 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD9O15198 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.8■□□□□ 0.6
SMAD9O15198 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.8■□□□□ 0.6
SMAD9O15198 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD9O15198 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD9O15198 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD9O15198 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMAD9O15198 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD9O15198 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.79■□□□□ 0.6
SMAD9O15198 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD9O15198 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD9O15198 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD9O15198 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD9O15198 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD9O15198 AC006015.1-201ENST00000429970 570 ntBASIC18.79■□□□□ 0.6
SMAD9O15198 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD9O15198 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.79■□□□□ 0.6
SMAD9O15198 KRT18P20-201ENST00000548986 1279 ntBASIC18.79■□□□□ 0.6
SMAD9O15198 UBE2DNL-204ENST00000602536 740 ntBASIC18.79■□□□□ 0.6
SMAD9O15198 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD9O15198 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD9O15198 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.79■□□□□ 0.6
SMAD9O15198 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SMAD9O15198 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD9O15198 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.79■□□□□ 0.6
SMAD9O15198 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.79■□□□□ 0.6
SMAD9O15198 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD9O15198 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD9O15198 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SMAD9O15198 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD9O15198 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD9O15198 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD9O15198 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SMAD9O15198 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.78■□□□□ 0.6
SMAD9O15198 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD9O15198 AC016769.1-201ENST00000409132 1010 ntBASIC18.78■□□□□ 0.6
SMAD9O15198 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD9O15198 POU5F1P4-201ENST00000413175 1085 ntBASIC18.78■□□□□ 0.6
SMAD9O15198 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.78■□□□□ 0.6
SMAD9O15198 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.78■□□□□ 0.6
SMAD9O15198 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SMAD9O15198 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD9O15198 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD9O15198 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD9O15198 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD9O15198 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD9O15198 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
SMAD9O15198 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.77■□□□□ 0.6
SMAD9O15198 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD9O15198 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.77■□□□□ 0.6
SMAD9O15198 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SMAD9O15198 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SMAD9O15198 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD9O15198 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD9O15198 SLC7A5P2-201ENST00000553010 536 ntBASIC18.77■□□□□ 0.6
SMAD9O15198 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.77■□□□□ 0.6
SMAD9O15198 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.77■□□□□ 0.6
SMAD9O15198 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD9O15198 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD9O15198 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SMAD9O15198 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.77■□□□□ 0.59
SMAD9O15198 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.77■□□□□ 0.59
SMAD9O15198 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SMAD9O15198 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMAD9O15198 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD9O15198 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms