Protein–RNA interactions for Protein: E5RIL1

UPK3BL2, Uroplakin-3b-like protein 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL2E5RIL1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.02■□□□□ 0.96
UPK3BL2E5RIL1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.02■□□□□ 0.96
UPK3BL2E5RIL1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPK3BL2E5RIL1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.02■□□□□ 0.96
UPK3BL2E5RIL1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.02■□□□□ 0.96
UPK3BL2E5RIL1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.02■□□□□ 0.96
UPK3BL2E5RIL1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK3BL2E5RIL1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.02■□□□□ 0.96
UPK3BL2E5RIL1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 AC092118.2-201ENST00000613495 667 ntBASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 RBM17P2-201ENST00000616397 1405 ntBASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
UPK3BL2E5RIL1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 RPS2P52-201ENST00000469610 820 ntBASIC21■□□□□ 0.95
UPK3BL2E5RIL1 AC007322.4-201ENST00000509611 723 ntBASIC21■□□□□ 0.95
UPK3BL2E5RIL1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 AC243732.1-201ENST00000612648 864 ntBASIC21■□□□□ 0.95
UPK3BL2E5RIL1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21■□□□□ 0.95
UPK3BL2E5RIL1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 OR10C1-204ENST00000622521 1039 ntBASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 MKRN4P-201ENST00000444706 1521 ntBASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3BL2E5RIL1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 AL512625.2-201ENST00000417533 625 ntBASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 DUSP5P2-201ENST00000426873 1033 ntBASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 GCSHP5-201ENST00000443090 522 ntBASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 AC245052.3-201ENST00000450182 901 ntBASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 AC098590.1-201ENST00000468126 897 ntBASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK3BL2E5RIL1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.97■□□□□ 0.95
UPK3BL2E5RIL1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms