Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM4A7MD48 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM4A7MD48 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SRRM4A7MD48 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.73■□□□□ 0.27
SRRM4A7MD48 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.73■□□□□ 0.27
SRRM4A7MD48 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.73■□□□□ 0.27
SRRM4A7MD48 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM4A7MD48 LINC02228-203ENST00000641970 1355 ntBASIC16.73■□□□□ 0.27
SRRM4A7MD48 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM4A7MD48 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRRM4A7MD48 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.72■□□□□ 0.27
SRRM4A7MD48 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.72■□□□□ 0.27
SRRM4A7MD48 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.72■□□□□ 0.27
SRRM4A7MD48 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.72■□□□□ 0.27
SRRM4A7MD48 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRRM4A7MD48 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SRRM4A7MD48 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.71■□□□□ 0.27
SRRM4A7MD48 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM4A7MD48 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM4A7MD48 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.71■□□□□ 0.27
SRRM4A7MD48 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.71■□□□□ 0.27
SRRM4A7MD48 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM4A7MD48 AC008175.2-201ENST00000612840 297 ntBASIC16.71■□□□□ 0.27
SRRM4A7MD48 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM4A7MD48 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM4A7MD48 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM4A7MD48 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM4A7MD48 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SRRM4A7MD48 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRRM4A7MD48 AC092667.1-201ENST00000434301 2586 ntBASIC16.71■□□□□ 0.26
SRRM4A7MD48 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM4A7MD48 LINC01521-201ENST00000504184 1943 ntBASIC16.7■□□□□ 0.26
SRRM4A7MD48 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM4A7MD48 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SRRM4A7MD48 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.7■□□□□ 0.26
SRRM4A7MD48 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SRRM4A7MD48 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.7■□□□□ 0.26
SRRM4A7MD48 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SRRM4A7MD48 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM4A7MD48 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM4A7MD48 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM4A7MD48 POU5F1P4-201ENST00000413175 1085 ntBASIC16.7■□□□□ 0.26
SRRM4A7MD48 ZNRF2P3-201ENST00000424200 374 ntBASIC16.7■□□□□ 0.26
SRRM4A7MD48 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.7■□□□□ 0.26
SRRM4A7MD48 AC123595.1-201ENST00000440769 1046 ntBASIC16.7■□□□□ 0.26
SRRM4A7MD48 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.7■□□□□ 0.26
SRRM4A7MD48 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.7■□□□□ 0.26
SRRM4A7MD48 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.7■□□□□ 0.26
SRRM4A7MD48 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.7■□□□□ 0.26
SRRM4A7MD48 AC138907.5-202ENST00000569484 235 ntBASIC16.7■□□□□ 0.26
SRRM4A7MD48 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.7■□□□□ 0.26
SRRM4A7MD48 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM4A7MD48 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM4A7MD48 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM4A7MD48 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM4A7MD48 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.7■□□□□ 0.26
SRRM4A7MD48 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRRM4A7MD48 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM4A7MD48 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM4A7MD48 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM4A7MD48 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM4A7MD48 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM4A7MD48 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.69■□□□□ 0.26
SRRM4A7MD48 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SRRM4A7MD48 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.69■□□□□ 0.26
SRRM4A7MD48 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.69■□□□□ 0.26
SRRM4A7MD48 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM4A7MD48 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM4A7MD48 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM4A7MD48 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM4A7MD48 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM4A7MD48 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM4A7MD48 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SRRM4A7MD48 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM4A7MD48 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM4A7MD48 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRRM4A7MD48 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.69■□□□□ 0.26
SRRM4A7MD48 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SRRM4A7MD48 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM4A7MD48 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM4A7MD48 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRRM4A7MD48 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SRRM4A7MD48 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SRRM4A7MD48 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.68■□□□□ 0.26
SRRM4A7MD48 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SRRM4A7MD48 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms