Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SPDYE4A6NLX3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SPDYE4A6NLX3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SPDYE4A6NLX3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
SPDYE4A6NLX3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.24■■□□□ 1.31
SPDYE4A6NLX3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.24■■□□□ 1.31
SPDYE4A6NLX3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SPDYE4A6NLX3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SPDYE4A6NLX3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SPDYE4A6NLX3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SPDYE4A6NLX3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SPDYE4A6NLX3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SPDYE4A6NLX3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPDYE4A6NLX3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.23■■□□□ 1.31
SPDYE4A6NLX3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPDYE4A6NLX3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPDYE4A6NLX3 BID-214ENST00000617586 542 ntTSL 5 BASIC23.23■■□□□ 1.31
SPDYE4A6NLX3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPDYE4A6NLX3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SPDYE4A6NLX3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SPDYE4A6NLX3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
SPDYE4A6NLX3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC23.22■■□□□ 1.31
SPDYE4A6NLX3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPDYE4A6NLX3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPDYE4A6NLX3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.22■■□□□ 1.31
SPDYE4A6NLX3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.22■■□□□ 1.31
SPDYE4A6NLX3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC23.22■■□□□ 1.31
SPDYE4A6NLX3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPDYE4A6NLX3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPDYE4A6NLX3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 AC006015.1-201ENST00000429970 570 ntBASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 MTND2P7-201ENST00000521337 640 ntBASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 BX005040.4-201ENST00000637145 1518 ntBASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPDYE4A6NLX3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 AC006970.2-201ENST00000450065 779 ntBASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 RN7SL275P-201ENST00000582762 335 ntBASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 AC073111.5-205ENST00000641717 521 ntBASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 LINC01006-201ENST00000333319 2292 ntBASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPDYE4A6NLX3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 AC004854.2-201ENST00000608450 1441 ntBASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 KRT19P1-201ENST00000405746 1186 ntBASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 AC132872.1-201ENST00000566986 1195 ntBASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 TPRG1LP1-201ENST00000598702 760 ntBASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 AC068587.7-201ENST00000641602 218 ntBASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.19■■□□□ 1.3
SPDYE4A6NLX3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 AC026185.1-201ENST00000445748 174 ntBASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms