Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SBNO1A3KN83 ISG20-202ENST00000379224 540 ntTSL 3 BASIC28.43■■■□□ 2.14
SBNO1A3KN83 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC28.43■■■□□ 2.14
SBNO1A3KN83 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SBNO1A3KN83 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC28.43■■■□□ 2.14
SBNO1A3KN83 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SBNO1A3KN83 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
SBNO1A3KN83 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SBNO1A3KN83 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SBNO1A3KN83 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC28.42■■■□□ 2.14
SBNO1A3KN83 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
SBNO1A3KN83 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC28.42■■■□□ 2.14
SBNO1A3KN83 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC28.42■■■□□ 2.14
SBNO1A3KN83 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SBNO1A3KN83 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC28.42■■■□□ 2.14
SBNO1A3KN83 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC28.42■■■□□ 2.14
SBNO1A3KN83 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
SBNO1A3KN83 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC28.42■■■□□ 2.14
SBNO1A3KN83 LTK-203ENST00000453182 2412 ntTSL 2 BASIC28.41■■■□□ 2.14
SBNO1A3KN83 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC28.41■■■□□ 2.14
SBNO1A3KN83 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC28.41■■■□□ 2.14
SBNO1A3KN83 RPS2P55-201ENST00000397318 883 ntBASIC28.41■■■□□ 2.14
SBNO1A3KN83 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SBNO1A3KN83 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC28.41■■■□□ 2.14
SBNO1A3KN83 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC28.41■■■□□ 2.14
SBNO1A3KN83 AC107956.1-201ENST00000494359 873 ntBASIC28.41■■■□□ 2.14
SBNO1A3KN83 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SBNO1A3KN83 REXO2-216ENST00000544196 452 ntTSL 3 BASIC28.41■■■□□ 2.14
SBNO1A3KN83 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC28.41■■■□□ 2.14
SBNO1A3KN83 NXN-202ENST00000537628 1340 ntTSL 3 BASIC28.41■■■□□ 2.14
SBNO1A3KN83 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC28.41■■■□□ 2.14
SBNO1A3KN83 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC28.41■■■□□ 2.14
SBNO1A3KN83 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC28.4■■■□□ 2.14
SBNO1A3KN83 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
SBNO1A3KN83 HES2-205ENST00000487437 968 ntTSL 3 BASIC28.4■■■□□ 2.14
SBNO1A3KN83 MAX-217ENST00000557277 728 ntTSL 3 BASIC28.4■■■□□ 2.14
SBNO1A3KN83 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC28.4■■■□□ 2.14
SBNO1A3KN83 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC28.4■■■□□ 2.14
SBNO1A3KN83 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SBNO1A3KN83 AC105020.6-201ENST00000621523 1217 ntBASIC28.4■■■□□ 2.14
SBNO1A3KN83 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC28.4■■■□□ 2.14
SBNO1A3KN83 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SBNO1A3KN83 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SBNO1A3KN83 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC28.4■■■□□ 2.14
SBNO1A3KN83 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
SBNO1A3KN83 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SBNO1A3KN83 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SBNO1A3KN83 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC28.4■■■□□ 2.14
SBNO1A3KN83 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
SBNO1A3KN83 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SBNO1A3KN83 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SBNO1A3KN83 AC007322.3-201ENST00000426526 701 ntBASIC28.39■■■□□ 2.14
SBNO1A3KN83 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC28.39■■■□□ 2.14
SBNO1A3KN83 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SBNO1A3KN83 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC28.39■■■□□ 2.14
SBNO1A3KN83 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC28.39■■■□□ 2.14
SBNO1A3KN83 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC28.39■■■□□ 2.14
SBNO1A3KN83 CYP21A1P-202ENST00000354927 1481 ntBASIC28.39■■■□□ 2.14
SBNO1A3KN83 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SBNO1A3KN83 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SBNO1A3KN83 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
SBNO1A3KN83 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
SBNO1A3KN83 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC28.39■■■□□ 2.13
SBNO1A3KN83 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC28.39■■■□□ 2.13
SBNO1A3KN83 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC28.39■■■□□ 2.13
SBNO1A3KN83 SERF2-207ENST00000409614 582 ntTSL 2 BASIC28.38■■■□□ 2.13
SBNO1A3KN83 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SBNO1A3KN83 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
SBNO1A3KN83 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC28.38■■■□□ 2.13
SBNO1A3KN83 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SBNO1A3KN83 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SBNO1A3KN83 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SBNO1A3KN83 PKM-204ENST00000449901 2526 ntTSL 2 BASIC28.38■■■□□ 2.13
SBNO1A3KN83 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC28.37■■■□□ 2.13
SBNO1A3KN83 PTPA-214ENST00000423100 988 ntTSL 2 BASIC28.37■■■□□ 2.13
SBNO1A3KN83 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC28.37■■■□□ 2.13
SBNO1A3KN83 ABHD17AP6-201ENST00000458502 1044 ntBASIC28.37■■■□□ 2.13
SBNO1A3KN83 AC133681.1-201ENST00000465482 601 ntBASIC28.37■■■□□ 2.13
SBNO1A3KN83 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SBNO1A3KN83 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC28.37■■■□□ 2.13
SBNO1A3KN83 MTDHP1-201ENST00000605323 784 ntBASIC28.37■■■□□ 2.13
SBNO1A3KN83 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SBNO1A3KN83 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SBNO1A3KN83 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SBNO1A3KN83 AC127496.7-201ENST00000625110 1798 ntBASIC28.37■■■□□ 2.13
SBNO1A3KN83 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SBNO1A3KN83 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SBNO1A3KN83 TSPY7P-201ENST00000431358 1114 ntBASIC28.37■■■□□ 2.13
SBNO1A3KN83 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SBNO1A3KN83 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC28.37■■■□□ 2.13
SBNO1A3KN83 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC28.37■■■□□ 2.13
SBNO1A3KN83 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC28.37■■■□□ 2.13
SBNO1A3KN83 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC28.36■■■□□ 2.13
SBNO1A3KN83 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
SBNO1A3KN83 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC28.36■■■□□ 2.13
SBNO1A3KN83 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC28.36■■■□□ 2.13
SBNO1A3KN83 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SBNO1A3KN83 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SBNO1A3KN83 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SBNO1A3KN83 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms